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LOC4326040 uncharacterized LOC4326040 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326040, updated on 17-Jul-2024

Summary

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Gene symbol
LOC4326040
Gene description
uncharacterized LOC4326040
Locus tag
OSNPB_010121100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4326040 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (1190629..1193883)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (1183399..1186689)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit A Neighboring gene uncharacterized LOC9268597 Neighboring gene uncharacterized LOC4326041 Neighboring gene uncharacterized LOC4326042

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-lysine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC4326040
Names
EEF1A lysine methyltransferase 2
Os01g0121100
P0684C01.7-1
P0684C01.7-2
protein-lysine N-methyltransferase mettl10
putative S locus-linked protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    1190629..1193883
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015785376.2 → XP_015640862.1  uncharacterized protein LOC4326040

    UniProtKB/TrEMBL
    A0A0P0UXW1, A0A8J8YQV1, A0A9K3Y791, A2WK21, A2ZNP4, Q5ZEM9
    Conserved Domains (1) summary
    pfam12847
    Location:174 → 282
    Methyltransf_18; Methyltransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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