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ralb.S v-ral simian leukemia viral oncogene homolog B S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432329, updated on 17-Aug-2024

Summary

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Official Symbol
ralb.S
Official Full Name
v-ral simian leukemia viral oncogene homolog B S homeolog
Primary source
Xenbase:XB-GENE-6255413
Locus tag
XELAEV_18046930mg
See related
EnsemblRapid:ENSXLAG00005016339
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
xralb; ralb-a; ralb-b
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Genomic context

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Location:
chromosome: 9_10S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (48636181..48646034)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (41965388..41975241)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene transcription factor CP2-like 1 S homeolog Neighboring gene GLI family zinc finger 2 S homeolog Neighboring gene inhibin subunit beta B S homeolog Neighboring gene SEC22 homolog A, vesicle trafficking protein S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC78904

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables G protein activity IEA
Inferred from Electronic Annotation
more info
  
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within Ras protein signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within actin cytoskeleton organization ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within fibroblast growth factor receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within regulation of developmental pigmentation ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within small GTPase-mediated signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in midbody IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ras-related protein ralB-B
Names
XRalB-B
ral b
v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)
NP_001085234.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091765.1 → NP_001085234.1  ras-related protein ralB-B

    See identical proteins and their annotated locations for NP_001085234.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072046
    UniProtKB/Swiss-Prot
    Q6IP71
    UniProtKB/TrEMBL
    A0A974BUJ8
    Related
    ENSXLAP00005048125.1, ENSXLAT00005049240.1
    Conserved Domains (2) summary
    smart00010
    Location:15 → 177
    small_GTPase; Small GTPase of the Ras superfamily; ill-defined subfamily
    cd04139
    Location:15 → 178
    RalA_RalB; Ral (Ras-like) family containing highly homologous RalA and RalB

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    48636181..48646034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6IP71.1 GenPept UniProtKB/Swiss-Prot:Q6IP71

Gene LinkOut

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Research Materials