ccdc174.S coiled-coil domain containing 174 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ccdc174.S
Official Full Name: coiled-coil domain containing 174 S homeolog
Primary source: Xenbase:XB-GENE-5781864
Locus tag: XELAEV_18025873mg
See related: EnsemblRapid:ENSXLAG00005020632 AllianceGenome:Xenbase:XB-GENE-5781864
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: c3orf19; ccdc174
Summary: Predicted to be located in nucleus. Orthologous to human CCDC174 (coiled-coil domain containing 174). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 4S

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4S	NC_054378.1 (111644112..111672619, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4S	NC_030731.1 (105188942..105217460, complement)

Chromosome 4S - NC_054378.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC432252

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091700.1 → NP_001085169.2 uncharacterized protein LOC432252

Status: VALIDATED

Source sequence(s)

BC072196

UniProtKB/TrEMBL

A0A8J0PVW0, A0A974D0F5

Related

ENSXLAP00005060528.1, ENSXLAT00005061977.1

Conserved Domains (1) summary

pfam13300
Location:214 → 296

DUF4078; Domain of unknown function (DUF4078)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

111644112..111672619 complement

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GenBank, FASTA, Sequence Viewer (Graphics)