ncs1.S neuronal calcium sensor 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ncs1.S
Official Full Name: neuronal calcium sensor 1 S homeolog
Primary source: Xenbase:XB-GENE-17342716
Locus tag: XELAEV_18041654mg
See related: EnsemblRapid:ENSXLAG00005016882
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: flup; freq; ncs-1; xfreq; frequenin
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Genomic context

Location:: chromosome: 8S

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8S	NC_054386.1 (33650831..33682591)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	8S	NC_030739.1 (33471905..33503845)

Chromosome 8S - NC_054386.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info
enables calcium sensitive guanylate cyclase activator activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in postsynaptic density	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC432213

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091667.1 → NP_001085136.1 uncharacterized protein LOC432213

See identical proteins and their annotated locations for NP_001085136.1

Status: PREDICTED

Source sequence(s)

BC072084

UniProtKB/TrEMBL

A0A974C2E0, Q6IP34

Related

ENSXLAP00005049743.1, ENSXLAT00005050884.1

Conserved Domains (2) summary

COG5126
Location:20 → 179

FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

cd00051
Location:100 → 172

EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...