rilpl2.L Rab interacting lysosomal protein like 2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rilpl2.L
Official Full Name: Rab interacting lysosomal protein like 2 L homeolog
Primary source: Xenbase:XB-GENE-5715356
Locus tag: XELAEV_18007782mg
See related: EnsemblRapid:ENSXLAG00005034522 AllianceGenome:Xenbase:XB-GENE-5715356
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rilpl2
Summary: Predicted to enable protein dimerization activity. Predicted to act upstream of or within epithelial cell morphogenesis and protein transport from ciliary membrane to plasma membrane. Predicted to be located in centrosome and cilium. Orthologous to human RILPL2 (Rab interacting lysosomal protein like 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 1L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (174836818..174844392)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (161685135..161692508)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables protein dimerization activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within epithelial cell morphogenesis	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein transport from ciliary membrane to plasma membrane	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in centrosome	IEA Inferred from Electronic Annotation more info
located_in centrosome	ISS Inferred from Sequence or Structural Similarity more info
located_in cilium	IEA Inferred from Electronic Annotation more info
located_in cilium	ISS Inferred from Sequence or Structural Similarity more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in cytosol	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: RILP-like protein 2

Names: rab-interacting lysosomal-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091627.1 → NP_001085096.2 RILP-like protein 2

See identical proteins and their annotated locations for NP_001085096.2

Status: PROVISIONAL

Source sequence(s)

BC072117

UniProtKB/Swiss-Prot

Q6IP02

UniProtKB/TrEMBL

A0A974E1D6

Related

ENSXLAP00005103194.1, ENSXLAT00005105199.1

Conserved Domains (2) summary

cd14445
Location:14 → 101

RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

pfam11461
Location:126 → 181

RILP; Rab interacting lysosomal protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

174836818..174844392

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041579820.1 → XP_041435754.1 RILP-like protein 2 isoform X1

UniProtKB/TrEMBL

A0A8J1M233, A0A974E1D6

Related

ENSXLAP00005103216.1, ENSXLAT00005105220.1

Conserved Domains (1) summary

cd14445
Location:14 → 101

RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
XM_041579810.1 → XP_041435744.1 RILP-like protein 2 isoform X1

UniProtKB/TrEMBL

A0A8J1M233, A0A974E1D6

Conserved Domains (1) summary

cd14445
Location:14 → 101

RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)