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scg5.S secretogranin V S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432151, updated on 18-Sep-2024

Summary

Official Symbol
scg5.S
Official Full Name
secretogranin V S homeolog
Primary source
Xenbase:XB-GENE-1010893
Locus tag
XELAEV_18041024mg
See related
EnsemblRapid:ENSXLAG00005020834
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
scg5
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Genomic context

See scg5.S in Genome Data Viewer
Location:
chromosome: 8S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8S NC_054386.1 (2158513..2170433)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8S NC_030739.1 (2143761..2155729)

Chromosome 8S - NC_054386.1Genomic Context describing neighboring genes Neighboring gene sprouty related, EVH1 domain containing 1 S homeolog Neighboring gene RAS guanyl releasing protein 1 S homeolog Neighboring gene ryanodine receptor 3 S homeolog Neighboring gene cholinergic receptor, muscarinic 5 S homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC83512

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of hormone secretion IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
secretogranin V S homeolog
Names
secretogranin V (7B2 protein)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091611.1NP_001085080.1  secretogranin V S homeolog precursor

    See identical proteins and their annotated locations for NP_001085080.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072358
    UniProtKB/TrEMBL
    A0A974C2M6, Q6INC5
    Related
    ENSXLAP00005061175.1, ENSXLAT00005062627.1
    Conserved Domains (1) summary
    pfam05281
    Location:31196
    Secretogranin_V; Neuroendocrine protein 7B2 precursor (Secretogranin V)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054386.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    2158513..2170433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)