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amph.L amphiphysin L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432150, updated on 18-Sep-2024

Summary

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Official Symbol
amph.L
Official Full Name
amphiphysin L homeolog
Primary source
Xenbase:XB-GENE-993132
Locus tag
XELAEV_18031260mg
See related
EnsemblRapid:ENSXLAG00005034915
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
amph
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Genomic context

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See amph.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
27
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (67208262..67318819)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (61859621..61949423)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene neuropeptide S receptor 1 L homeolog Neighboring gene POU class 6 homeobox 2 L homeolog Neighboring gene probable non-functional T cell receptor gamma variable 10 Neighboring gene Ig kappa chain V-VI region NQ5-61.1.2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83546

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
amphiphysin L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091610.1 → NP_001085079.1  amphiphysin L homeolog

    See identical proteins and their annotated locations for NP_001085079.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072364
    UniProtKB/TrEMBL
    Q6INB9
    Conserved Domains (2) summary
    cd07611
    Location:30 → 240
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    cd12140
    Location:594 → 665
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    67208262..67318819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041565404.1 → XP_041421338.1  amphiphysin L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8FWV9, A0A974CMR6
    Related
    ENSXLAP00005104413.1, ENSXLAT00005106436.1
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:257 → 497
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:673 → 744
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  2. XM_041565406.1 → XP_041421340.1  amphiphysin L homeolog isoform X3

    UniProtKB/TrEMBL
    A0A8J1KVK3
    Related
    ENSXLAP00005104476.1, ENSXLAT00005106500.1
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:257 → 497
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:661 → 732
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  3. XM_041565412.1 → XP_041421346.1  amphiphysin L homeolog isoform X9

    UniProtKB/TrEMBL
    A0A8J1KVL4
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:250 → 500
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:590 → 661
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  4. XM_041565407.1 → XP_041421341.1  amphiphysin L homeolog isoform X4

    UniProtKB/TrEMBL
    A0A8J1KVL0
    Related
    ENSXLAP00005104761.1, ENSXLAT00005106797.1
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:257 → 475
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:655 → 726
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  5. XM_041565413.1 → XP_041421347.1  amphiphysin L homeolog isoform X10

    UniProtKB/TrEMBL
    A0A8J1KVL6
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:247 → 503
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:572 → 643
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  6. XM_041565410.1 → XP_041421344.1  amphiphysin L homeolog isoform X7

    UniProtKB/TrEMBL
    A0A8J1KYK9
    Related
    ENSXLAP00005104989.1, ENSXLAT00005107031.1
    Conserved Domains (3) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    cd12140
    Location:637 → 708
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  7. XM_041565411.1 → XP_041421345.1  amphiphysin L homeolog isoform X8

    UniProtKB/TrEMBL
    A0A8J1KVK8
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:250 → 564
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:625 → 696
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  8. XM_041565408.1 → XP_041421342.1  amphiphysin L homeolog isoform X5

    UniProtKB/TrEMBL
    A0A8J1KVL1
    Related
    ENSXLAP00005104935.1, ENSXLAT00005106976.1
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:257 → 475
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:655 → 726
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  9. XM_041565414.1 → XP_041421348.1  amphiphysin L homeolog isoform X11

    UniProtKB/TrEMBL
    A0A8J1KX67
    Conserved Domains (3) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PTZ00449
    Location:247 → 503
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:572 → 643
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  10. XM_041565409.1 → XP_041421343.1  amphiphysin L homeolog isoform X6

    UniProtKB/TrEMBL
    A0A8J1KYK9
    Conserved Domains (3) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    cd12140
    Location:637 → 708
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  11. XM_041565415.1 → XP_041421349.1  amphiphysin L homeolog isoform X12

    UniProtKB/TrEMBL
    A0A8J1KYL3
    Conserved Domains (3) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    cd12140
    Location:554 → 625
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  12. XM_041565405.1 → XP_041421339.1  amphiphysin L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1KYK4
    Related
    ENSXLAP00005104546.1, ENSXLAT00005106573.1
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:257 → 490
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:666 → 737
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  13. XM_041565416.1 → XP_041421350.1  amphiphysin L homeolog isoform X13

    UniProtKB/TrEMBL
    A0A8J1KVL2
    Conserved Domains (4) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    PHA02682
    Location:248 → 358
    PHA02682; ORF080 virion core protein; Provisional
    PTZ00449
    Location:250 → 569
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd12140
    Location:630 → 701
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I
Nucleotide Protein Strain
Heading Accession and Version

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