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ier5.L immediate early response 5 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432098, updated on 4-Nov-2024

Summary

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Official Symbol
ier5.L
Official Full Name
immediate early response 5 L homeolog
Primary source
Xenbase:XB-GENE-6078584
Locus tag
XELAEV_18023273mg
See related
AllianceGenome:Xenbase:XB-GENE-6078584
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ier5; sbbi48
Summary
Orthologous to human IER5 (immediate early response 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ier5.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (96575849..96578258, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (91307622..91310031, complement)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 420 Neighboring gene calcium channel, voltage-dependent, R type, alpha 1E subunit L homeolog Neighboring gene uncharacterized LOC121403066 Neighboring gene syntaxin 6 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83180

General protein information

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Preferred Names
immediate early response 5 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091562.1 → NP_001085031.1  immediate early response 5 L homeolog

    See identical proteins and their annotated locations for NP_001085031.1

    Status: PROVISIONAL

    Source sequence(s)
    BC071044
    UniProtKB/TrEMBL
    A0A974D4Q7, Q6IR56
    Conserved Domains (1) summary
    pfam05760
    Location:23 → 285
    IER; Immediate early response protein (IER)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    96575849..96578258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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