stam.L signal transducing adaptor molecule L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: stam.L
Official Full Name: signal transducing adaptor molecule L homeolog
Primary source: Xenbase:XB-GENE-864873
Locus tag: XELAEV_18030811mg
See related: EnsemblRapid:ENSXLAG00005029540
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: stam
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Genomic context

Location:: chromosome: 6L

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (27949398..27979474, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (25465742..25496041, complement)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables phosphatidylinositol binding	IEA Inferred from Electronic Annotation more info
enables ubiquitin binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in early endosome membrane	IEA Inferred from Electronic Annotation more info
located_in endosome	IEA Inferred from Electronic Annotation more info
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: signal transducing adaptor molecule L homeolog

Names: signal transducing adaptor molecule (SH3 domain and ITAM motif) 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091528.1 → NP_001084997.1 signal transducing adaptor molecule L homeolog

See identical proteins and their annotated locations for NP_001084997.1

Status: PROVISIONAL

Source sequence(s)

BC070613

UniProtKB/TrEMBL

A0A974CM62, Q6IRR1

Related

ENSXLAP00005088660.1, ENSXLAT00005090329.1

Conserved Domains (3) summary

cd11964
Location:211 → 265

SH3_STAM1; Src homology 3 domain of Signal Transducing Adaptor Molecule 1

cd03568
Location:9 → 142

VHS_STAM; VHS domain family, STAM subfamily; members include STAM (Signal Transducing Adaptor Molecule), EAST (EGFR-associated protein with SH3 and TAM domains) and Hbp (Hrs-binding protein). Collectively, they are referred to as STAM. All STAMs have at their ...

pfam03127
Location:304 → 375

GAT; GAT domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

27949398..27979474 complement

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GenBank, FASTA, Sequence Viewer (Graphics)