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nudc.L nudC nuclear distribution protein L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432020, updated on 4-Nov-2024

Summary

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Official Symbol
nudc.L
Official Full Name
nudC nuclear distribution protein L homeolog
Primary source
Xenbase:XB-GENE-985472
Locus tag
XELAEV_18012105mg
See related
EnsemblRapid:ENSXLAG00005035210 AllianceGenome:Xenbase:XB-GENE-985472
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
nudc
Summary
Predicted to enable unfolded protein binding activity. Predicted to act upstream of or within cell division and protein folding. Predicted to be located in cytoplasm; microtubule; and midbody. Orthologous to human NUDC (nuclear distribution C, dynein complex regulator). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See nudc.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (61023706..61042651, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (58501106..58520059, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein MGC130623 Neighboring gene uncharacterized LOC121399940 Neighboring gene keratinocyte differentiation factor 1 L homeolog Neighboring gene G-patch domain containing 3 L homeolog Neighboring gene phosphatidylinositol glycan anchor biosynthesis class V S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83068

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein folding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule IEA
Inferred from Electronic Annotation
more info
  
located_in midbody IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nudC nuclear distribution protein L homeolog
Names
nuclear distribution C homolog
nuclear distribution gene C homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091492.1 → NP_001084961.1  nudC nuclear distribution protein L homeolog

    See identical proteins and their annotated locations for NP_001084961.1

    Status: PROVISIONAL

    Source sequence(s)
    BC070681
    UniProtKB/TrEMBL
    A0A974DMI6, Q6IRP6
    Related
    ENSXLAP00005105340.1, ENSXLAT00005107389.1
    Conserved Domains (3) summary
    cd06492
    Location:170 → 256
    p23_mNUDC_like; p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) ...
    pfam14050
    Location:9 → 60
    Nudc_N; N-terminal conserved domain of Nudc
    pfam16273
    Location:95 → 125
    NuDC; Nuclear distribution C domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    61023706..61042651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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