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cmc1.L C-x(9)-C motif containing 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432002, updated on 4-Nov-2024

Summary

Official Symbol
cmc1.L
Official Full Name
C-x(9)-C motif containing 1 L homeolog
Primary source
Xenbase:XB-GENE-971044
Locus tag
XELAEV_18031067mg
See related
EnsemblRapid:ENSXLAG00005013106 AllianceGenome:Xenbase:XB-GENE-971044
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cmc1
Summary
Predicted to be located in mitochondrion. Orthologous to human CMC1 (C-X9-C motif containing 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See cmc1.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (50331481..50355711)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (46374032..46398362)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene eomesodermin L homeolog Neighboring gene uncharacterized LOC121394859 Neighboring gene uncharacterized LOC108718492 Neighboring gene uncharacterized LOC108717599

Genomic regions, transcripts, and products

General protein information

Preferred Names
C-x(9)-C motif containing 1 L homeolog
Names
COX assembly mitochondrial protein 1 homolog
COX assembly mitochondrial protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091475.1NP_001084944.1  C-x(9)-C motif containing 1 L homeolog

    See identical proteins and their annotated locations for NP_001084944.1

    Status: PROVISIONAL

    Source sequence(s)
    BC070574
    UniProtKB/TrEMBL
    A0A974CN45, Q6NRY5
    Related
    ENSXLAP00005038601.1, ENSXLAT00005039522.1
    Conserved Domains (1) summary
    pfam08583
    Location:1987
    Cmc1; Cytochrome c oxidase biogenesis protein Cmc1 like

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    50331481..50355711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)