nsd2.S nuclear receptor binding SET domain protein 2 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: nsd2.S
Official Full Name: nuclear receptor binding SET domain protein 2 S homeolog
Primary source: Xenbase:XB-GENE-988828
Locus tag: XELAEV_18008870mg
See related: EnsemblRapid:ENSXLAG00005025168
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: whsc1; whsc1.S
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Genomic context

Location:: chromosome: 1S

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1S	NC_054372.1 (12416823..12442948)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1S	NC_030725.1 (12272236..12298382)

Chromosome 1S - NC_054372.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: nuclear receptor binding SET domain protein 2 S homeolog

Names: Wolf-Hirschhorn syndrome candidate 1 S homeolog

NP_001084939.1

EC 2.1.1.354

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091470.2 → NP_001084939.1 nuclear receptor binding SET domain protein 2 S homeolog

See identical proteins and their annotated locations for NP_001084939.1

Status: PROVISIONAL

Source sequence(s)

BC070604

UniProtKB/TrEMBL

Q6NRV7

Related

ENSXLAP00005075499.1, ENSXLAT00005077080.1

Conserved Domains (2) summary

cd05837
Location:189 → 308

MSH6_like; The PWWP domain is present in MSH6, a mismatch repair protein homologous to bacterial MutS. The PWWP domain of histone-lysine N-methyltransferase, also known as Nuclear SET domain-containing protein 3, is also included. Mutations in MSH6 have been ...

cl00082
Location:415 → 460

HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...