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ccdc149.S coiled-coil domain containing 149 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 431953, updated on 4-Nov-2024

Summary

Official Symbol
ccdc149.S
Official Full Name
coiled-coil domain containing 149 S homeolog
Primary source
Xenbase:XB-GENE-995141
Locus tag
XELAEV_18008969mg
See related
EnsemblRapid:ENSXLAG00005027106 AllianceGenome:Xenbase:XB-GENE-995141
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ccdc149
Summary
Orthologous to human CCDC149 (coiled-coil domain containing 149). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See ccdc149.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (21627244..21686410, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (21485155..21545884, complement)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene DEAH-box helicase 15 S homeolog Neighboring gene superoxide dismutase 3 S homeolog Neighboring gene leucine-rich repeat LGI family member 2 S homeolog Neighboring gene Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase S homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
coiled-coil domain-containing protein 149
Names
Coiled-coil domain-containing protein 149

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    21627244..21686410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018236054.2XP_018091543.1  coiled-coil domain-containing protein 149 isoform X2

    UniProtKB/Swiss-Prot
    Q6NRH3
    UniProtKB/TrEMBL
    A0A8J0TXV6
    Related
    ENSXLAP00005081092.1, ENSXLAT00005082703.1
  2. XM_018236043.2XP_018091532.1  coiled-coil domain-containing protein 149 isoform X1

    UniProtKB/Swiss-Prot
    Q6NRH3
    UniProtKB/TrEMBL
    A0A1L8HKX7, A0A974I044
    Related
    ENSXLAP00005080984.1, ENSXLAT00005082595.1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001091433.1: Suppressed sequence

    Description
    NM_001091433.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.