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ttc5.L tetratricopeptide repeat domain 5 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 431931, updated on 17-Aug-2024

Summary

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Official Symbol
ttc5.L
Official Full Name
tetratricopeptide repeat domain 5 L homeolog
Primary source
Xenbase:XB-GENE-1001737
Locus tag
XELAEV_18007341mg
See related
EnsemblRapid:ENSXLAG00005020148
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ttc5
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Genomic context

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See ttc5.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (154764729..154774586)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (141785334..141793913)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108715080 Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene small nucleolar RNA SNORA79 Neighboring gene cyclin B1 interacting protein 1, E3 ubiquitin protein ligase L homeolog Neighboring gene amphinase-4-like L homeolog Neighboring gene lysophosphatidylcholine acyltransferase 4 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
tetratricopeptide repeat domain 5 L homeolog; tetratricopeptide repeat protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    154764729..154774586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018259936.2 → XP_018115425.1  tetratricopeptide repeat protein 5

    UniProtKB/TrEMBL
    A0A974E0I2, A0JMT7, Q6NRA9
    Related
    ENSXLAP00005059071.1, ENSXLAT00005060510.1
Nucleotide Protein Strain
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