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epb41l4a.S erythrocyte membrane protein band 4.1 like 4A S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 431840, updated on 17-Aug-2024

Summary

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Official Symbol
epb41l4a.S
Official Full Name
erythrocyte membrane protein band 4.1 like 4A S homeolog
Primary source
Xenbase:XB-GENE-953984
Locus tag
XELAEV_18010777mg
See related
EnsemblRapid:ENSXLAG00005005804
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
epb41l4a; epbl41l4a
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Genomic context

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Location:
chromosome: 1S
Exon count:
24
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (161186079..161298602)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (145186824..145299225)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene signal recognition particle 19kDa S homeolog Neighboring gene adenomatous polyposis coli S homeolog Neighboring gene StAR related lipid transfer domain containing 4 S homeolog Neighboring gene calcium/calmodulin-dependent protein kinase IV S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression analysis of epb41l4a during Xenopus laevis embryogenesis. Guo Y, et al. Dev Genes Evol, 2011 Jun. PMID 21556855, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC82292

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
erythrocyte membrane protein band 4.1 like 4A S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091331.1 → NP_001084800.1  erythrocyte membrane protein band 4.1 like 4A S homeolog

    See identical proteins and their annotated locations for NP_001084800.1

    Status: PROVISIONAL

    Source sequence(s)
    BC070666
    UniProtKB/TrEMBL
    A0A974DX03, Q6NRR3
    Related
    ENSXLAP00005017271.1, ENSXLAT00005017567.1
    Conserved Domains (5) summary
    smart00295
    Location:13 → 211
    B41; Band 4.1 homologues
    cd13186
    Location:207 → 296
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    pfam00373
    Location:105 → 211
    FERM_M; FERM central domain
    pfam08736
    Location:311 → 354
    FA; FERM adjacent (FA)
    pfam09379
    Location:15 → 80
    FERM_N; FERM N-terminal domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    161186079..161298602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018235838.2 → XP_018091327.1  erythrocyte membrane protein band 4.1 like 4A S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0TUG7, A0A974DX03
    Related
    ENSXLAP00005017310.1, ENSXLAT00005017606.1

  2. XM_018235848.2 → XP_018091337.1  erythrocyte membrane protein band 4.1 like 4A S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0TUZ5, A0A974DX03
    Related
    ENSXLAP00005017316.1, ENSXLAT00005017612.1

  3. XM_018235856.2 → XP_018091345.1  erythrocyte membrane protein band 4.1 like 4A S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A8J0TMI7, A0A974DX03
    Related
    ENSXLAP00005017327.1, ENSXLAT00005017623.1

  4. XM_018235866.2 → XP_018091355.1  erythrocyte membrane protein band 4.1 like 4A S homeolog isoform X4

    UniProtKB/TrEMBL
    A0A8J0TMJ4, A0A974DX03
    Related
    ENSXLAP00005017301.1, ENSXLAT00005017597.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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