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ints2.S integrator complex subunit 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 431825, updated on 18-Sep-2024

Summary

Official Symbol
ints2.S
Official Full Name
integrator complex subunit 2 S homeolog
Primary source
Xenbase:XB-GENE-5787314
Locus tag
XELAEV_18015288mg
See related
EnsemblRapid:ENSXLAG00005004586
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ints2
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Genomic context

See ints2.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
25
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (83745473..83783669)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (75175694..75213845)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase B1 S homeolog Neighboring gene mediator complex subunit 13 S homeolog Neighboring gene Fanconi anemia group J protein homolog Neighboring gene T-box 4 S homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC78791

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within snRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of integrator complex IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
integrator complex subunit 2 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091319.1NP_001084788.1  integrator complex subunit 2 S homeolog

    See identical proteins and their annotated locations for NP_001084788.1

    Status: PROVISIONAL

    Source sequence(s)
    BC070524
    UniProtKB/TrEMBL
    Q6NS25
    Related
    ENSXLAP00005013757.1, ENSXLAT00005013939.1
    Conserved Domains (1) summary
    pfam14750
    Location:231103
    INTS2; Integrator complex subunit 2

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    83745473..83783669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018248181.2XP_018103670.1  integrator complex subunit 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8H7Z9, A0A974DKB0