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HMCN1 hemicentin 1 [ Gallus gallus (chicken) ]

Gene ID: 429823, updated on 10-Oct-2024

Summary

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Symbol
HMCN1provided by CGNC
Full Name
hemicentin 1provided by CGNC
Primary source
CGNC:3829
See related
Ensembl:ENSGALG00010021099
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See HMCN1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
114
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (10346584..10627949, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (10373884..10655228, complement)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene odr-4 GPCR localization factor homolog Neighboring gene translocated promoter region, nuclear basket protein Neighboring gene proteoglycan 4 Neighboring gene uncharacterized LOC121111393 Neighboring gene uncharacterized LOC107053953 Neighboring gene influenza virus NS1A binding protein Neighboring gene SWT1, RNA endoribonuclease homolog Neighboring gene tRNA methyltransferase 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables axon guidance receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hemicentin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10346584..10627949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046944923.1 → XP_046800879.1  hemicentin-1 isoform X13

  2. XM_025153031.3 → XP_025008799.2  hemicentin-1 isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2440 → 2504
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5083 → 5120
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4594 → 4646
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:4394 → 4474
    IG; Immunoglobulin
    smart00410
    Location:3667 → 3748
    IG_like; Immunoglobulin like
    cd00054
    Location:5121 → 5154
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:5163 → 5204
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2434 → 2439
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4759 → 4983
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3194 → 3288
    Ig; Immunoglobulin domain

  3. XM_040704903.2 → XP_040560837.1  hemicentin-1 isoform X10

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2402 → 2466
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5045 → 5082
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4556 → 4608
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3822 → 3894
    IG; Immunoglobulin
    smart00410
    Location:3629 → 3710
    IG_like; Immunoglobulin like
    cd00054
    Location:5083 → 5116
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5125 → 5166
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2396 → 2401
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4721 → 4945
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3156 → 3250
    Ig; Immunoglobulin domain

  4. XM_025153033.3 → XP_025008801.2  hemicentin-1 isoform X11

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2402 → 2466
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5045 → 5082
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4556 → 4608
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3629 → 3710
    IG; Immunoglobulin
    smart00410
    Location:4356 → 4436
    IG_like; Immunoglobulin like
    cd00054
    Location:5083 → 5116
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5125 → 5166
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2396 → 2401
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4721 → 4945
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3156 → 3250
    Ig; Immunoglobulin domain

  5. XM_040704909.2 → XP_040560843.1  hemicentin-1 isoform X24

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4818 → 4855
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4443 → 4495
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:2974 → 3055
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:4856 → 4889
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:4898 → 4939
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4494 → 4718
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  6. XM_046944926.1 → XP_046800882.1  hemicentin-1 isoform X23

    UniProtKB/TrEMBL
    A0A8V0ZGD7
    Related
    ENSGALP00010030343.1, ENSGALT00010051152.1

  7. XM_015290592.4 → XP_015146078.2  hemicentin-1 isoform X21

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:2974 → 3055
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5212 → 5260
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5129 → 5170
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  8. XM_025153032.3 → XP_025008800.2  hemicentin-1 isoform X9

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3720 → 3801
    IG; Immunoglobulin
    smart00410
    Location:4447 → 4527
    IG_like; Immunoglobulin like
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5129 → 5170
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  9. XM_046944925.1 → XP_046800881.1  hemicentin-1 isoform X20

  10. XM_040704907.2 → XP_040560841.1  hemicentin-1 isoform X18

    UniProtKB/TrEMBL
    A0A8V0ZAP5, A0A8V0ZNK5
    Related
    ENSGALP00010030346.1, ENSGALT00010051155.1
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3720 → 3801
    IG; Immunoglobulin
    smart00410
    Location:617 → 696
    IG_like; Immunoglobulin like
    cd00054
    Location:5129 → 5162
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5171 → 5212
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  11. XM_040704901.2 → XP_040560835.1  hemicentin-1 isoform X7

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:617 → 696
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5129 → 5162
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5171 → 5212
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  12. XM_025153030.3 → XP_025008798.2  hemicentin-1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3913 → 3985
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5129 → 5162
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5171 → 5212
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  13. XM_046944924.1 → XP_046800880.1  hemicentin-1 isoform X19

  14. XM_040704906.2 → XP_040560840.1  hemicentin-1 isoform X17

    UniProtKB/TrEMBL
    A0A8V0ZHQ9, A0A8V0ZNK5
    Related
    ENSGALP00010030334.1, ENSGALT00010051143.1
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3720 → 3801
    IG; Immunoglobulin
    smart00410
    Location:4447 → 4527
    IG_like; Immunoglobulin like
    cd00054
    Location:5257 → 5305
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5174 → 5215
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  15. XM_025153029.3 → XP_025008797.2  hemicentin-1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3074 → 3150
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5174 → 5215
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  16. XM_015290591.4 → XP_015146077.2  hemicentin-1 isoform X16

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3720 → 3801
    IG; Immunoglobulin
    smart00410
    Location:3913 → 3985
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  17. XM_015290590.4 → XP_015146076.2  hemicentin-1 isoform X14

    UniProtKB/TrEMBL
    A0A8V0ZHN4, A0A8V0ZNK5
    Related
    ENSGALP00010030308.1, ENSGALT00010051117.1
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:4447 → 4527
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  18. XM_015290586.4 → XP_015146072.2  hemicentin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZHJ2, A0A8V0ZNK5
    Related
    ENSGALP00010030289.1, ENSGALT00010051098.1
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:1085 → 1166
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  19. XM_040704904.2 → XP_040560838.1  hemicentin-1 isoform X12

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:4447 → 4527
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  20. XM_025153028.3 → XP_025008796.2  hemicentin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:1085 → 1166
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  21. XM_040704905.2 → XP_040560839.1  hemicentin-1 isoform X15

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2359 → 2423
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5002 → 5039
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4513 → 4565
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:1042 → 1123
    IG; Immunoglobulin
    smart00410
    Location:3586 → 3667
    IG_like; Immunoglobulin like
    cd00054
    Location:5040 → 5073
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:5082 → 5123
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2353 → 2358
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4678 → 4902
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3113 → 3207
    Ig; Immunoglobulin domain

  22. XM_040704902.2 → XP_040560836.1  hemicentin-1 isoform X8

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2412 → 2476
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5055 → 5092
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4566 → 4618
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3639 → 3720
    IG; Immunoglobulin
    smart00410
    Location:4366 → 4446
    IG_like; Immunoglobulin like
    cd00054
    Location:5093 → 5126
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:5135 → 5176
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2406 → 2411
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4731 → 4955
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3166 → 3260
    Ig; Immunoglobulin domain

  23. XM_040704900.2 → XP_040560834.1  hemicentin-1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2452 → 2516
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5095 → 5132
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4606 → 4658
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:1135 → 1216
    IG; Immunoglobulin
    smart00410
    Location:3679 → 3760
    IG_like; Immunoglobulin like
    cd00054
    Location:5133 → 5166
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:5175 → 5216
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2446 → 2451
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4771 → 4995
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3206 → 3300
    Ig; Immunoglobulin domain

  24. XM_040704908.1 → XP_040560842.1  hemicentin-1 isoform X22

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2264 → 2328
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4907 → 4944
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4418 → 4470
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:947 → 1028
    IG; Immunoglobulin
    smart00410
    Location:3491 → 3572
    IG_like; Immunoglobulin like
    cd00054
    Location:4945 → 4978
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:4987 → 5028
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2258 → 2263
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4583 → 4807
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3018 → 3112
    Ig; Immunoglobulin domain

  25. XM_040704910.1 → XP_040560844.1  hemicentin-1 isoform X25

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2158 → 2222
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4801 → 4838
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4312 → 4364
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:750 → 831
    IG; Immunoglobulin
    smart00410
    Location:3385 → 3466
    IG_like; Immunoglobulin like
    cd00054
    Location:4839 → 4872
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:4881 → 4922
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2152 → 2157
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4477 → 4701
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:2912 → 3006
    Ig; Immunoglobulin domain

  26. XM_040704911.2 → XP_040560845.1  hemicentin-1 isoform X25

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2158 → 2222
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4801 → 4838
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4312 → 4364
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:750 → 831
    IG; Immunoglobulin
    smart00410
    Location:3385 → 3466
    IG_like; Immunoglobulin like
    cd00054
    Location:4839 → 4872
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:4881 → 4922
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2152 → 2157
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4477 → 4701
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:2912 → 3006
    Ig; Immunoglobulin domain

RNA

  1. XR_003076395.3 RNA Sequence

  2. XR_005861916.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    10373884..10655228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046923350.1 → XP_046779306.1  hemicentin-1 isoform X13

  2. XM_040677600.2 → XP_040533534.1  hemicentin-1 isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2440 → 2504
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5083 → 5120
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4594 → 4646
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:4394 → 4474
    IG; Immunoglobulin
    smart00410
    Location:3667 → 3748
    IG_like; Immunoglobulin like
    cd00054
    Location:5121 → 5154
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:5163 → 5204
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2434 → 2439
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4759 → 4983
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3194 → 3288
    Ig; Immunoglobulin domain

  3. XM_040677605.2 → XP_040533539.1  hemicentin-1 isoform X10

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2402 → 2466
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5045 → 5082
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4556 → 4608
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3822 → 3894
    IG; Immunoglobulin
    smart00410
    Location:3629 → 3710
    IG_like; Immunoglobulin like
    cd00054
    Location:5083 → 5116
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5125 → 5166
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2396 → 2401
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4721 → 4945
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3156 → 3250
    Ig; Immunoglobulin domain

  4. XM_040677606.2 → XP_040533540.1  hemicentin-1 isoform X11

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2402 → 2466
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5045 → 5082
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4556 → 4608
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3629 → 3710
    IG; Immunoglobulin
    smart00410
    Location:4356 → 4436
    IG_like; Immunoglobulin like
    cd00054
    Location:5083 → 5116
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5125 → 5166
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2396 → 2401
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4721 → 4945
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3156 → 3250
    Ig; Immunoglobulin domain

  5. XM_040677616.2 → XP_040533550.1  hemicentin-1 isoform X24

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4818 → 4855
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4443 → 4495
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:2974 → 3055
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:4856 → 4889
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:4898 → 4939
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4494 → 4718
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  6. XM_046923353.1 → XP_046779309.1  hemicentin-1 isoform X23

    UniProtKB/TrEMBL
    A0A8V0ZGD7

  7. XM_040677613.2 → XP_040533547.1  hemicentin-1 isoform X21

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:2974 → 3055
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5212 → 5260
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5129 → 5170
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  8. XM_040677604.2 → XP_040533538.1  hemicentin-1 isoform X9

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3720 → 3801
    IG; Immunoglobulin
    smart00410
    Location:4447 → 4527
    IG_like; Immunoglobulin like
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5129 → 5170
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  9. XM_046923352.1 → XP_046779308.1  hemicentin-1 isoform X20

  10. XM_040677612.2 → XP_040533546.1  hemicentin-1 isoform X18

    UniProtKB/TrEMBL
    A0A8V0ZAP5, A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3720 → 3801
    IG; Immunoglobulin
    smart00410
    Location:617 → 696
    IG_like; Immunoglobulin like
    cd00054
    Location:5129 → 5162
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5171 → 5212
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  11. XM_040677601.2 → XP_040533535.1  hemicentin-1 isoform X7

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:617 → 696
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5129 → 5162
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5171 → 5212
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  12. XM_040677599.2 → XP_040533533.1  hemicentin-1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5091 → 5128
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3913 → 3985
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5129 → 5162
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5171 → 5212
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  13. XM_046923351.1 → XP_046779307.1  hemicentin-1 isoform X19

  14. XM_040677611.2 → XP_040533545.1  hemicentin-1 isoform X17

    UniProtKB/TrEMBL
    A0A8V0ZHQ9, A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3720 → 3801
    IG; Immunoglobulin
    smart00410
    Location:4447 → 4527
    IG_like; Immunoglobulin like
    cd00054
    Location:5257 → 5305
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5174 → 5215
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  15. XM_040677598.2 → XP_040533532.1  hemicentin-1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3074 → 3150
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5174 → 5215
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  16. XM_040677610.2 → XP_040533544.1  hemicentin-1 isoform X16

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3720 → 3801
    IG; Immunoglobulin
    smart00410
    Location:3913 → 3985
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  17. XM_040677608.2 → XP_040533542.1  hemicentin-1 isoform X14

    UniProtKB/TrEMBL
    A0A8V0ZHN4, A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:4447 → 4527
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  18. XM_040677596.2 → XP_040533530.1  hemicentin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZHJ2, A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:1085 → 1166
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  19. XM_040677607.2 → XP_040533541.1  hemicentin-1 isoform X12

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:4447 → 4527
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  20. XM_040677595.2 → XP_040533529.1  hemicentin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (11) summary
    smart00408
    Location:2493 → 2557
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5136 → 5173
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4647 → 4699
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:1085 → 1166
    IG; Immunoglobulin
    smart00410
    Location:3720 → 3801
    IG_like; Immunoglobulin like
    cd00054
    Location:5174 → 5207
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00198
    Location:41 → 197
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam07645
    Location:5216 → 5257
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2487 → 2492
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4812 → 5036
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3247 → 3341
    Ig; Immunoglobulin domain

  21. XM_040677609.2 → XP_040533543.1  hemicentin-1 isoform X15

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2359 → 2423
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5002 → 5039
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4513 → 4565
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:1042 → 1123
    IG; Immunoglobulin
    smart00410
    Location:3586 → 3667
    IG_like; Immunoglobulin like
    cd00054
    Location:5040 → 5073
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:5082 → 5123
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2353 → 2358
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4678 → 4902
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3113 → 3207
    Ig; Immunoglobulin domain

  22. XM_040677602.2 → XP_040533536.1  hemicentin-1 isoform X8

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2412 → 2476
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5055 → 5092
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4566 → 4618
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:3639 → 3720
    IG; Immunoglobulin
    smart00410
    Location:4366 → 4446
    IG_like; Immunoglobulin like
    cd00054
    Location:5093 → 5126
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:5135 → 5176
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2406 → 2411
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4731 → 4955
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3166 → 3260
    Ig; Immunoglobulin domain

  23. XM_040677597.2 → XP_040533531.1  hemicentin-1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2452 → 2516
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:5095 → 5132
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4606 → 4658
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:1135 → 1216
    IG; Immunoglobulin
    smart00410
    Location:3679 → 3760
    IG_like; Immunoglobulin like
    cd00054
    Location:5133 → 5166
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:5175 → 5216
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2446 → 2451
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4771 → 4995
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3206 → 3300
    Ig; Immunoglobulin domain

  24. XM_040677615.1 → XP_040533549.1  hemicentin-1 isoform X22

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2264 → 2328
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4907 → 4944
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4418 → 4470
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:947 → 1028
    IG; Immunoglobulin
    smart00410
    Location:3491 → 3572
    IG_like; Immunoglobulin like
    cd00054
    Location:4945 → 4978
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:4987 → 5028
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2258 → 2263
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4583 → 4807
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3018 → 3112
    Ig; Immunoglobulin domain

  25. XM_040677614.1 → XP_040533548.1  hemicentin-1 isoform X22

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2264 → 2328
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4907 → 4944
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4418 → 4470
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:947 → 1028
    IG; Immunoglobulin
    smart00410
    Location:3491 → 3572
    IG_like; Immunoglobulin like
    cd00054
    Location:4945 → 4978
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:4987 → 5028
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2258 → 2263
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4583 → 4807
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:3018 → 3112
    Ig; Immunoglobulin domain

  26. XM_040677617.1 → XP_040533551.1  hemicentin-1 isoform X25

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2158 → 2222
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4801 → 4838
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4312 → 4364
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:750 → 831
    IG; Immunoglobulin
    smart00410
    Location:3385 → 3466
    IG_like; Immunoglobulin like
    cd00054
    Location:4839 → 4872
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:4881 → 4922
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2152 → 2157
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4477 → 4701
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:2912 → 3006
    Ig; Immunoglobulin domain

  27. XM_040677618.2 → XP_040533552.1  hemicentin-1 isoform X25

    UniProtKB/TrEMBL
    A0A8V0ZNK5
    Conserved Domains (10) summary
    smart00408
    Location:2158 → 2222
    IGc2; Immunoglobulin C-2 Type
    smart00179
    Location:4801 → 4838
    EGF_CA; Calcium-binding EGF-like domain
    smart00209
    Location:4312 → 4364
    TSP1; Thrombospondin type 1 repeats
    smart00409
    Location:750 → 831
    IG; Immunoglobulin
    smart00410
    Location:3385 → 3466
    IG_like; Immunoglobulin like
    cd00054
    Location:4839 → 4872
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:4881 → 4922
    EGF_CA; Calcium-binding EGF domain
    cd00096
    Location:2152 → 2157
    Ig; Ig strand A' [structural motif]
    cl00186
    Location:4477 → 4701
    nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
    cl11960
    Location:2912 → 3006
    Ig; Immunoglobulin domain

RNA

  1. XR_005852151.2 RNA Sequence

  2. XR_005852152.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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