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LMF2 lipase maturation factor 2 [ Gallus gallus (chicken) ]

Gene ID: 429380, updated on 10-Oct-2024

Summary

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Official Symbol
LMF2provided by CGNC
Official Full Name
lipase maturation factor 2provided by CGNC
Primary source
CGNC:53638
See related
Ensembl:ENSGALG00010006421
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See LMF2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (1188297..1195042, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (1194618..1201381, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene adrenomedullin 2 Neighboring gene myo-inositol oxygenase Neighboring gene non-SMC condensin II complex subunit H2 Neighboring gene uncharacterized LOC121109254 Neighboring gene SCO2, cytochrome c oxidase assembly protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lipase maturation factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031572.3 → NP_001026743.3  lipase maturation factor 2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000006
    UniProtKB/Swiss-Prot
    Q5ZKZ9
    UniProtKB/TrEMBL
    A0A8V0XVE6
    Related
    ENSGALP00010008976.1, ENSGALT00010015331.1

  2. NM_001389318.2 → NP_001376247.2  lipase maturation factor 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000006
    UniProtKB/Swiss-Prot
    Q5ZKZ9
    Related
    ENSGALP00010008974.1, ENSGALT00010015323.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1188297..1195042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046943117.1 → XP_046799073.1  lipase maturation factor 2 isoform X1

  2. XM_046943118.1 → XP_046799074.1  lipase maturation factor 2 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1194618..1201381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046908598.1 → XP_046764554.1  lipase maturation factor 2 isoform X1

  2. XM_046908599.1 → XP_046764555.1  lipase maturation factor 2 isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZKZ9.2 GenPept UniProtKB/Swiss-Prot:Q5ZKZ9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials