U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PRDX6 peroxiredoxin 6 [ Gallus gallus (chicken) ]

Gene ID: 429062, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
PRDX6provided by CGNC
Official Full Name
peroxiredoxin 6provided by CGNC
Primary source
CGNC:2214
See related
Ensembl:ENSGALG00010013528
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
NSGPx; aiPLA2; LPCAT-5; 1-Cys PRX; peroxiredoxin-6
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PRDX6 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (4314803..4321750, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (4326263..4333210, complement)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene phospholipid phosphatase 6-like Neighboring gene family with sequence similarity 78 member B Neighboring gene dimethylaniline monooxygenase [N-oxide-forming] 5-like Neighboring gene transcriptional adaptor 1 Neighboring gene Fas ligand (TNF superfamily, member 6) Neighboring gene tumor necrosis factor superfamily member 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Qualitative and quantitative peptidomic and proteomic approaches to phenotyping chicken semen. Labas V, et al. J Proteomics, 2015 Jan 1. PMID 25086240
  2. Conserved BK channel-protein interactions reveal signals relevant to cell death and survival. Sokolowski B, et al. PLoS One, 2011. PMID 22174833, Free PMC Article
  3. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peroxiredoxin activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular oxidant detoxification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
peroxiredoxin-6
Names
1-Cys peroxiredoxin
LPC acyltransferase 5
acidic calcium-independent phospholipase A2
glutathione-dependent peroxiredoxin
lyso-PC acyltransferase 5
lysophosphatidylcholine acyltransferase 5
non-selenium glutathione peroxidase
NP_001034418.2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039329.3 → NP_001034418.2  peroxiredoxin-6

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000237
    UniProtKB/Swiss-Prot
    Q5ZJF4
    Related
    ENSGALP00010019283.1, ENSGALT00010032554.1
    Conserved Domains (1) summary
    cd03016
    Location:6 → 221
    PRX_1cys; Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4314803..4321750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4326263..4333210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZJF4.3 GenPept UniProtKB/Swiss-Prot:Q5ZJF4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials