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SEPTIN3 septin 3 [ Gallus gallus (chicken) ]

Gene ID: 427899, updated on 17-Aug-2024

Summary

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Official Symbol
SEPTIN3provided by CGNC
Official Full Name
septin 3provided by CGNC
Primary source
CGNC:9033
See related
Ensembl:ENSGALG00010009995
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SEPT3; Sep-03
Orthologs
human mouse all
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Genomic context

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See SEPTIN3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (49481248..49493996, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (49778863..49791487, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene alpha-N-acetylgalactosaminidase Neighboring gene WBP2 N-terminal like Neighboring gene uncharacterized LOC100859314 Neighboring gene centromere protein M

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuronal-specific septin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    49481248..49493996 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025155078.3 → XP_025010846.3  neuronal-specific septin-3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YCE6
    Related
    ENSGALP00010013611.1, ENSGALT00010023788.1

  2. XM_025155079.3 → XP_025010847.3  neuronal-specific septin-3 isoform X2

  3. XM_025155085.3 → XP_025010853.2  neuronal-specific septin-3 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YCD8
    Related
    ENSGALP00010013606.1, ENSGALT00010023782.1
    Conserved Domains (1) summary
    cd01850
    Location:59 → 332
    CDC_Septin; CDC/Septin GTPase family

  4. XM_025155082.3 → XP_025010850.2  neuronal-specific septin-3 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YCD8
    Conserved Domains (1) summary
    cd01850
    Location:59 → 333
    CDC_Septin; CDC/Septin GTPase family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    49778863..49791487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040660532.2 → XP_040516466.2  neuronal-specific septin-3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YCE6

  2. XM_040660533.2 → XP_040516467.2  neuronal-specific septin-3 isoform X2

  3. XM_040660535.2 → XP_040516469.1  neuronal-specific septin-3 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YCD8
    Conserved Domains (1) summary
    cd01850
    Location:59 → 332
    CDC_Septin; CDC/Septin GTPase family

  4. XM_040660534.2 → XP_040516468.1  neuronal-specific septin-3 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YCD8
    Conserved Domains (1) summary
    cd01850
    Location:59 → 333
    CDC_Septin; CDC/Septin GTPase family
Nucleotide Protein Strain
Heading Accession and Version

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