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GSG2 germ cell associated 2, haspin [ Gallus gallus (chicken) ]

Gene ID: 427834, updated on 17-Aug-2024

Summary

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Symbol
GSG2provided by CGNC
Full Name
germ cell associated 2, haspinprovided by CGNC
Primary source
CGNC:24802
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
HASPIN
Orthologs
human mouse all
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Genomic context

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See GSG2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
1
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (7102305..7105170, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (6839204..6842064, complement)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene centromere protein V Neighboring gene polyubiquitin-C-like Neighboring gene transient receptor potential cation channel subfamily V member 2 Neighboring gene purinergic receptor P2X 5 Neighboring gene Tax1 binding protein 3 Neighboring gene ER membrane protein complex subunit 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3T3 kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase haspin
Names
histone H3 associated protein kinase
XP_040543290.1
XP_425408.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7102305..7105170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_425408.7 → XP_425408.3  serine/threonine-protein kinase haspin

    UniProtKB/TrEMBL
    A0A8V1AM12
    Conserved Domains (2) summary
    PRK07764
    Location:134 → 322
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cl21453
    Location:418 → 797
    PKc_like; Protein Kinases, catalytic domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6839204..6842064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040687356.2 → XP_040543290.1  serine/threonine-protein kinase haspin

    UniProtKB/TrEMBL
    A0A8V1AM12
    Conserved Domains (2) summary
    PRK07764
    Location:134 → 322
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cl21453
    Location:418 → 797
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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