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CARD9 caspase recruitment domain family member 9 [ Gallus gallus (chicken) ]

Gene ID: 427756, updated on 10-Oct-2024

Summary

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Symbol
CARD9provided by CGNC
Full Name
caspase recruitment domain family member 9provided by CGNC
Primary source
CGNC:1336
See related
Ensembl:ENSGALG00010028162
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CARD9 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (8515857..8523374)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (7926828..7934347)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene peptidase, mitochondrial processing alpha subunit Neighboring gene serologically defined colon cancer antigen 3 Neighboring gene small nuclear RNA activating complex polypeptide 4 Neighboring gene DNL-type zinc finger Neighboring gene G protein signaling modulator 1 Neighboring gene uncharacterized LOC121107112

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caspase recruitment domain-containing protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    8515857..8523374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046901962.1 → XP_046757918.1  caspase recruitment domain-containing protein 9 isoform X4

  2. XM_015279806.4 → XP_015135292.1  caspase recruitment domain-containing protein 9 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AHS1
    Conserved Domains (2) summary
    COG1196
    Location:147 → 470
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd08809
    Location:29 → 114
    CARD_CARD9; Caspase activation and recruitment domain of CARD9-like proteins

  3. XM_046901960.1 → XP_046757916.1  caspase recruitment domain-containing protein 9 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A7Q2
    Related
    ENSGALP00010041980.1, ENSGALT00010068237.1

  4. XM_040649422.2 → XP_040505356.1  caspase recruitment domain-containing protein 9 isoform X6

    UniProtKB/TrEMBL
    A0A8V1AHS1
    Conserved Domains (2) summary
    COG1196
    Location:159 → 430
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd08809
    Location:41 → 126
    CARD_CARD9; Caspase activation and recruitment domain of CARD9-like proteins

  5. XM_015279805.4 → XP_015135291.1  caspase recruitment domain-containing protein 9 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AHS1
    Related
    ENSGALP00010041978.1, ENSGALT00010068235.1
    Conserved Domains (2) summary
    COG1196
    Location:159 → 481
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd08809
    Location:41 → 126
    CARD_CARD9; Caspase activation and recruitment domain of CARD9-like proteins

  6. XM_040649423.2 → XP_040505357.1  caspase recruitment domain-containing protein 9 isoform X7

    UniProtKB/TrEMBL
    A0A8V1AHS1
    Conserved Domains (2) summary
    COG1196
    Location:159 → 429
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd08809
    Location:41 → 126
    CARD_CARD9; Caspase activation and recruitment domain of CARD9-like proteins

  7. XM_015279807.4 → XP_015135293.1  caspase recruitment domain-containing protein 9 isoform X5

    UniProtKB/TrEMBL
    A0A8V1AFF2
    Related
    ENSGALP00010041979.1, ENSGALT00010068236.1
    Conserved Domains (2) summary
    COG1196
    Location:159 → 482
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd08809
    Location:41 → 126
    CARD_CARD9; Caspase activation and recruitment domain of CARD9-like proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7926828..7934347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046929096.1 → XP_046785052.1  caspase recruitment domain-containing protein 9 isoform X4

  2. XM_040686152.2 → XP_040542086.1  caspase recruitment domain-containing protein 9 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AHS1
    Conserved Domains (2) summary
    COG1196
    Location:147 → 470
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd08809
    Location:29 → 114
    CARD_CARD9; Caspase activation and recruitment domain of CARD9-like proteins

  3. XM_046929095.1 → XP_046785051.1  caspase recruitment domain-containing protein 9 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A7Q2

  4. XM_040686150.2 → XP_040542084.1  caspase recruitment domain-containing protein 9 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AHS1
    Conserved Domains (2) summary
    COG1196
    Location:159 → 481
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd08809
    Location:41 → 126
    CARD_CARD9; Caspase activation and recruitment domain of CARD9-like proteins

  5. XM_040686153.2 → XP_040542087.1  caspase recruitment domain-containing protein 9 isoform X5

    UniProtKB/TrEMBL
    A0A8V1AFF2
    Conserved Domains (2) summary
    COG1196
    Location:159 → 482
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd08809
    Location:41 → 126
    CARD_CARD9; Caspase activation and recruitment domain of CARD9-like proteins
Nucleotide Protein Strain
Heading Accession and Version

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