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HNRNPK heterogeneous nuclear ribonucleoprotein K [ Gallus gallus (chicken) ]

Gene ID: 427458, updated on 10-Oct-2024

Summary

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Official Symbol
HNRNPKprovided by CGNC
Official Full Name
heterogeneous nuclear ribonucleoprotein Kprovided by CGNC
Primary source
CGNC:53093
See related
Ensembl:ENSGALG00010014677
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See HNRNPK in Genome Data Viewer
Location:
chromosome: Z
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (40684072..40702528, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (40684072..40702528, complement)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 27 Neighboring gene Q-nucleotide N-glycosylase 1 Neighboring gene microRNA 7-1 Neighboring gene RecQ mediated genome instability 1 Neighboring gene uncharacterized LOC121108594

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein K

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    40684072..40702528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025144765.3 → XP_025000533.1  heterogeneous nuclear ribonucleoprotein K isoform X4

    UniProtKB/TrEMBL
    A0A8V0YPH1
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 40
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:39 → 102
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:117 → 186
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:350 → 423
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  2. XM_425032.8 → XP_425032.3  heterogeneous nuclear ribonucleoprotein K isoform X3

    See identical proteins and their annotated locations for XP_425032.3

    UniProtKB/TrEMBL
    A0A175KE57, A0A8V0YW88, E1C453
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 40
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:39 → 102
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:117 → 186
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:350 → 423
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  3. XM_015280374.4 → XP_015135860.1  heterogeneous nuclear ribonucleoprotein K isoform X1

    UniProtKB/TrEMBL
    A0A8V0YW88
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 44
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:43 → 106
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:121 → 190
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:354 → 427
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  4. XM_004949203.5 → XP_004949260.1  heterogeneous nuclear ribonucleoprotein K isoform X4

    See identical proteins and their annotated locations for XP_004949260.1

    UniProtKB/TrEMBL
    A0A8V0YPH1
    Related
    ENSGALP00010020545.1, ENSGALT00010035271.1
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 40
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:39 → 102
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:117 → 186
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:350 → 423
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  5. XM_004949202.5 → XP_004949259.1  heterogeneous nuclear ribonucleoprotein K isoform X3

    See identical proteins and their annotated locations for XP_004949259.1

    UniProtKB/TrEMBL
    A0A175KE57, A0A8V0YW88, E1C453
    Related
    ENSGALP00010020554.1, ENSGALT00010035304.1
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 40
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:39 → 102
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:117 → 186
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:350 → 423
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  6. XM_015280372.4 → XP_015135858.1  heterogeneous nuclear ribonucleoprotein K isoform X1

    UniProtKB/TrEMBL
    A0A8V0YW88
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 44
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:43 → 106
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:121 → 190
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:354 → 427
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  7. XM_025144766.3 → XP_025000534.1  heterogeneous nuclear ribonucleoprotein K isoform X4

    UniProtKB/TrEMBL
    A0A8V0YPH1
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 40
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:39 → 102
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:117 → 186
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:350 → 423
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  8. XM_015280377.4 → XP_015135863.1  heterogeneous nuclear ribonucleoprotein K isoform X3

    UniProtKB/TrEMBL
    A0A175KE57, A0A8V0YW88, E1C453
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 40
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:39 → 102
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:117 → 186
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:350 → 423
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  9. XM_015280375.4 → XP_015135861.1  heterogeneous nuclear ribonucleoprotein K isoform X1

    UniProtKB/TrEMBL
    A0A8V0YW88
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 44
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:43 → 106
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:121 → 190
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:354 → 427
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  10. XM_025144764.3 → XP_025000532.1  heterogeneous nuclear ribonucleoprotein K isoform X4

    UniProtKB/TrEMBL
    A0A8V0YPH1
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 40
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:39 → 102
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:117 → 186
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:350 → 423
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  11. XM_003643006.6 → XP_003643054.2  heterogeneous nuclear ribonucleoprotein K isoform X3

    See identical proteins and their annotated locations for XP_003643054.2

    UniProtKB/TrEMBL
    A0A175KE57, A0A8V0YW88, E1C453
    Related
    ENSGALP00010020540.1, ENSGALT00010035258.1
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 40
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:39 → 102
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:117 → 186
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:350 → 423
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

  12. XM_046905934.1 → XP_046761890.1  heterogeneous nuclear ribonucleoprotein K isoform X2

    UniProtKB/TrEMBL
    A0A8V0YPE3
    Related
    ENSGALP00010020537.1, ENSGALT00010035248.1

  13. XM_015280373.4 → XP_015135859.1  heterogeneous nuclear ribonucleoprotein K isoform X1

    UniProtKB/TrEMBL
    A0A8V0YW88
    Conserved Domains (4) summary
    pfam08067
    Location:4 → 44
    ROKNT; ROKNT (NUC014) domain
    cd22432
    Location:43 → 106
    KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22433
    Location:121 → 190
    KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
    cd22434
    Location:354 → 427
    KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    40684072..40702528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046936777.1 → XP_046792733.1  heterogeneous nuclear ribonucleoprotein K isoform X4

  2. XM_046936773.1 → XP_046792729.1  heterogeneous nuclear ribonucleoprotein K isoform X3

    UniProtKB/TrEMBL
    A0A175KE57, E1C453

  3. XM_046936769.1 → XP_046792725.1  heterogeneous nuclear ribonucleoprotein K isoform X1

  4. XM_046936776.1 → XP_046792732.1  heterogeneous nuclear ribonucleoprotein K isoform X4

  5. XM_046936771.1 → XP_046792727.1  heterogeneous nuclear ribonucleoprotein K isoform X3

    UniProtKB/TrEMBL
    A0A175KE57, E1C453

  6. XM_046936767.1 → XP_046792723.1  heterogeneous nuclear ribonucleoprotein K isoform X1

  7. XM_046936778.1 → XP_046792734.1  heterogeneous nuclear ribonucleoprotein K isoform X4

  8. XM_046936774.1 → XP_046792730.1  heterogeneous nuclear ribonucleoprotein K isoform X3

    UniProtKB/TrEMBL
    A0A175KE57, E1C453

  9. XM_046936768.1 → XP_046792724.1  heterogeneous nuclear ribonucleoprotein K isoform X1

  10. XM_046936775.1 → XP_046792731.1  heterogeneous nuclear ribonucleoprotein K isoform X4

  11. XM_046936772.1 → XP_046792728.1  heterogeneous nuclear ribonucleoprotein K isoform X3

    UniProtKB/TrEMBL
    A0A175KE57, E1C453

  12. XM_046936770.1 → XP_046792726.1  heterogeneous nuclear ribonucleoprotein K isoform X2

    UniProtKB/TrEMBL
    A0A8V0YPE3

  13. XM_046936766.1 → XP_046792722.1  heterogeneous nuclear ribonucleoprotein K isoform X1

Nucleotide Protein
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