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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Gallus gallus (chicken) ]

Gene ID: 425302, updated on 17-Aug-2024

Summary

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Official Symbol
KIRREL1provided by CGNC
Official Full Name
kirre like nephrin family adhesion molecule 1provided by CGNC
Primary source
CGNC:52412
See related
Ensembl:ENSGALG00010027600
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
KIRREL
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (1157635..1177510, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (1158642..1178667, complement)

Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene SLAM family member 8 Neighboring gene T-lymphocyte surface antigen Ly-9-like Neighboring gene uncharacterized LOC101750757 Neighboring gene natural killer cell receptor 2B4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1157635..1177510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_423078.8 → XP_423078.3  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A1D5PQ46
    Related
    ENSGALP00010040909.1, ENSGALT00010066861.1
    Conserved Domains (5) summary
    cd05898
    Location:391 → 488
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00410
    Location:314 → 389
    IG_like; Immunoglobulin like
    pfam07679
    Location:22 → 116
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:316 → 389
    Ig_2; Immunoglobulin domain
    cl11960
    Location:138 → 219
    Ig; Immunoglobulin domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1158642..1178667 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691021.2 → XP_040546955.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A1D5PQ46
    Conserved Domains (3) summary
    smart00409
    Location:27 → 116
    IG; Immunoglobulin
    cd00096
    Location:392 → 396
    Ig; Ig strand A [structural motif]
    cl11960
    Location:391 → 488
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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