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r-l rudimentary-like [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42493, updated on 28-Oct-2024

Summary

Official Symbol
r-lprovided by FlyBase
Official Full Name
rudimentary-likeprovided by FlyBase
Primary source
FLYBASE:FBgn0003257
Locus tag
Dmel_CG3593
See related
AllianceGenome:FB:FBgn0003257
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG3593; Dmel\CG3593; OMPDC; OPRT; ral; UMPS
Summary
Enables orotate phosphoribosyltransferase activity and orotidine-5'-phosphate decarboxylase activity. Predicted to be involved in UMP biosynthetic process and pyrimidine nucleobase biosynthetic process. Is expressed in several structures, including embryonic/larval midgut primordium; epithelium; gut section; mesoderm; and visceral mesoderm derivative. Human ortholog(s) of this gene implicated in orotic aciduria and purine-pyrimidine metabolic disorder. Orthologous to human UMPS (uridine monophosphate synthetase). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See r-l in Genome Data Viewer
Location:
93B10-93B10; 3-70 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21070557..21073319, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16896279..16899041, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Malvolio Neighboring gene cortactin Neighboring gene Annexin B9 Neighboring gene doublesex-Mab related 93B Neighboring gene Hematopoietically expressed homeobox

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
rudimentary-like
Names
CG3593-PA
UMP synthase
orotidine phosphate decarboxylase
r-l-PA
NP_524427.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    21070557..21073319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079703.3NP_524427.1  rudimentary-like [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524427.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q01637, Q24221, Q9VDF2
    Related
    FBpp0083440
    Conserved Domains (2) summary
    pfam00215
    Location:258479
    OMPdecase; Orotidine 5'-phosphate decarboxylase / HUMPS family
    cl00309
    Location:1202
    PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain