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PCYT1A phosphate cytidylyltransferase 1, choline, alpha [ Gallus gallus (chicken) ]

Gene ID: 424915, updated on 10-Oct-2024

Summary

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Symbol
PCYT1Aprovided by CGNC
Full Name
phosphate cytidylyltransferase 1, choline, alphaprovided by CGNC
Primary source
CGNC:5636
See related
Ensembl:ENSGALG00010014935
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PCYT1A in Genome Data Viewer
Location:
chromosome: 9
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (14594029..14617497)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (14390066..14413540)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene receptor transporter protein 2 Neighboring gene programmed cell death 1 Neighboring gene Tctex1 domain containing 2 Neighboring gene uncharacterized LOC100857766 Neighboring gene solute carrier family 51 subunit alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase A
XP_025009197.1
XP_040534566.1
XP_040534568.1
XP_040561585.1
XP_046754442.1
XP_046754443.1
XP_046754444.1
XP_046779996.1
XP_046779997.1
XP_046779998.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    14594029..14617497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046898487.1 → XP_046754443.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AGL8

  2. XM_046898488.1 → XP_046754444.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AGL8

  3. XM_046898486.1 → XP_046754442.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AGL8

  4. XM_025153429.3 → XP_025009197.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AGL8, E1C4K8
    Related
    ENSGALP00010020852.1, ENSGALT00010035933.1
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 309
    PLN02413; choline-phosphate cytidylyltransferase

  5. XM_040705651.2 → XP_040561585.1  choline-phosphate cytidylyltransferase A isoform X2

    UniProtKB/TrEMBL
    E1C4K8
    Conserved Domains (1) summary
    PLN02413
    Location:5 → 242
    PLN02413; choline-phosphate cytidylyltransferase

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    14390066..14413540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046924041.1 → XP_046779997.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AGL8

  2. XM_046924042.1 → XP_046779998.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AGL8

  3. XM_046924040.1 → XP_046779996.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AGL8

  4. XM_040678632.2 → XP_040534566.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AGL8, E1C4K8
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 309
    PLN02413; choline-phosphate cytidylyltransferase

  5. XM_040678634.2 → XP_040534568.1  choline-phosphate cytidylyltransferase A isoform X2

    UniProtKB/TrEMBL
    E1C4K8
    Conserved Domains (1) summary
    PLN02413
    Location:5 → 242
    PLN02413; choline-phosphate cytidylyltransferase
Nucleotide Protein
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