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TCTEX1D2 Tctex1 domain containing 2 [ Gallus gallus (chicken) ]

Gene ID: 424914, updated on 17-Aug-2024

Summary

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Symbol
TCTEX1D2provided by CGNC
Full Name
Tctex1 domain containing 2provided by CGNC
Primary source
CGNC:52284
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TCTEX1D2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (14594032..14604267)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (14390069..14400312)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene receptor transporter protein 2 Neighboring gene programmed cell death 1 Neighboring gene phosphate cytidylyltransferase 1, choline, alpha Neighboring gene uncharacterized LOC100857766 Neighboring gene solute carrier family 51 subunit alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cytoplasmic dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tctex1 domain-containing protein 2; dynein light chain Tctex-type protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    14594032..14604267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046898489.1 → XP_046754445.1  dynein light chain Tctex-type protein 2B

  2. XM_422724.7 → XP_422724.1  dynein light chain Tctex-type protein 2B

    UniProtKB/TrEMBL
    R4GKS8
    Conserved Domains (1) summary
    cd21459
    Location:23 → 126
    DLC-like_TCTEX1D2; dynein light chain (DLC)-like domain found in Tctex1 domain-containing protein 2 (TCTEX1D2) and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    14390069..14400312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046924043.1 → XP_046779999.1  dynein light chain Tctex-type protein 2B

  2. XM_040678640.2 → XP_040534574.1  dynein light chain Tctex-type protein 2B

    Conserved Domains (1) summary
    cd21459
    Location:23 → 126
    DLC-like_TCTEX1D2; dynein light chain (DLC)-like domain found in Tctex1 domain-containing protein 2 (TCTEX1D2) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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