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BCL6 B-cell CLL/lymphoma 6 [ Gallus gallus (chicken) ]

Gene ID: 424912, updated on 17-Aug-2024

Summary

Symbol
BCL6provided by CGNC
Full Name
B-cell CLL/lymphoma 6provided by CGNC
Primary source
CGNC:5559
See related
Ensembl:ENSGALG00010013635
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (14479373..14495601)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (14275276..14291508)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101751200 Neighboring gene uncharacterized LOC107054097 Neighboring gene somatostatin 1 Neighboring gene mannan binding lectin serine peptidase 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
B-cell lymphoma 6 protein homolog
Names
B-cell CLL/lymphoma 6 (zinc finger protein 51)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012930.1NP_001012948.1  B-cell lymphoma 6 protein homolog

    See identical proteins and their annotated locations for NP_001012948.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ719545
    UniProtKB/Swiss-Prot
    Q5ZM39
    Related
    ENSGALP00010019424.1, ENSGALT00010032792.1
    Conserved Domains (4) summary
    smart00225
    Location:33129
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:578598
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:22126
    BTB; BTB/POZ domain
    pfam13465
    Location:590615
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    14479373..14495601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015291406.4XP_015146892.2  B-cell lymphoma 6 protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0YN89
    Conserved Domains (3) summary
    COG5189
    Location:545650
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:578598
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18331
    Location:8125
    BTB_POZ_ZBTB27_BCL6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in B-cell lymphoma 6 protein (BCL-6)
  2. XM_040705572.2XP_040561506.1  B-cell lymphoma 6 protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0YN89
    Conserved Domains (3) summary
    COG5189
    Location:545650
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:578598
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18331
    Location:8125
    BTB_POZ_ZBTB27_BCL6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in B-cell lymphoma 6 protein (BCL-6)
  3. XM_025153369.3XP_025009137.2  B-cell lymphoma 6 protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0YN89
    Conserved Domains (3) summary
    COG5189
    Location:545650
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:578598
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18331
    Location:8125
    BTB_POZ_ZBTB27_BCL6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in B-cell lymphoma 6 protein (BCL-6)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    14275276..14291508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046923881.1XP_046779837.1  B-cell lymphoma 6 protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0YN89
  2. XM_046923883.1XP_046779839.1  B-cell lymphoma 6 protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0YN89
  3. XM_046923882.1XP_046779838.1  B-cell lymphoma 6 protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0YN89