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LSG1 large 60S subunit nuclear export GTPase 1 [ Gallus gallus (chicken) ]

Gene ID: 424897, updated on 17-Aug-2024

Summary

Symbol
LSG1provided by CGNC
Full Name
large 60S subunit nuclear export GTPase 1provided by CGNC
Primary source
CGNC:5331
See related
Ensembl:ENSGALG00010014344
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See LSG1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (12503221..12515147)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (12306087..12318013)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054105 Neighboring gene family with sequence similarity 43 member A Neighboring gene uncharacterized LOC107054103 Neighboring gene ATPase 13A3 Neighboring gene glycoprotein V platelet

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in ribosomal subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
large subunit GTPase 1 homolog
NP_001006549.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006549.2NP_001006549.2  large subunit GTPase 1 homolog

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000240
    UniProtKB/TrEMBL
    A0A8V0YNU0
    Related
    ENSGALP00010020293.1, ENSGALT00010034554.1
    Conserved Domains (2) summary
    cd01857
    Location:154439
    HSR1_MMR1; A circularly permuted subfamily of the Ras GTPases
    COG1161
    Location:141563
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    12503221..12515147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    12306087..12318013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)