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SAP130 Sin3A associated protein 130 [ Gallus gallus (chicken) ]

Gene ID: 424756, updated on 10-Oct-2024

Summary

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Symbol
SAP130provided by CGNC
Full Name
Sin3A associated protein 130provided by CGNC
Primary source
CGNC:1470
See related
Ensembl:ENSGALG00010024136
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SAP130 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
22
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (1111376..1130913, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (979939..999472, complement)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107051881 Neighboring gene RNA polymerase II subunit D Neighboring gene AMMECR1 like Neighboring gene UDP-glucose glycoprotein glucosyltransferase 1 Neighboring gene uncharacterized LOC121111493

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sin3-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP130
Names
130 kDa Sin3-associated polypeptide
Sin3A associated protein 130kDa
sin3-associated polypeptide p130
NP_001026472.2
NP_001383092.1
XP_015132352.2
XP_015132353.2
XP_040561453.1
XP_046779708.1
XP_046779709.1
XP_046779710.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031301.2 → NP_001026472.2  histone deacetylase complex subunit SAP130 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000240
    UniProtKB/Swiss-Prot
    Q5F3U0
    UniProtKB/TrEMBL
    A0A8V1A3I1
    Related
    ENSGALP00010035826.1, ENSGALT00010058861.1
    Conserved Domains (2) summary
    PHA03247
    Location:8 → 341
    PHA03247; large tegument protein UL36; Provisional
    pfam05109
    Location:231 → 515
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. NM_001396163.1 → NP_001383092.1  histone deacetylase complex subunit SAP130 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000240
    UniProtKB/Swiss-Prot
    Q5F3U0
    Conserved Domains (2) summary
    PHA03247
    Location:8 → 341
    PHA03247; large tegument protein UL36; Provisional
    pfam05109
    Location:231 → 515
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1111376..1130913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015276866.4 → XP_015132352.2  histone deacetylase complex subunit SAP130 isoform X2

    UniProtKB/Swiss-Prot
    Q5F3U0
    Conserved Domains (2) summary
    PHA03247
    Location:8 → 341
    PHA03247; large tegument protein UL36; Provisional
    pfam05109
    Location:231 → 515
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_015276867.4 → XP_015132353.2  histone deacetylase complex subunit SAP130 isoform X1

    UniProtKB/Swiss-Prot
    Q5F3U0
    Conserved Domains (2) summary
    PHA03247
    Location:8 → 341
    PHA03247; large tegument protein UL36; Provisional
    pfam05109
    Location:231 → 515
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  3. XM_040705519.2 → XP_040561453.1  histone deacetylase complex subunit SAP130 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZQV1
    Related
    ENSGALP00010035820.1, ENSGALT00010058855.1
    Conserved Domains (2) summary
    PHA03247
    Location:8 → 341
    PHA03247; large tegument protein UL36; Provisional
    pfam05109
    Location:231 → 515
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

RNA

  1. XR_005862088.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    979939..999472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046923753.1 → XP_046779709.1  histone deacetylase complex subunit SAP130 isoform X2

  2. XM_046923752.1 → XP_046779708.1  histone deacetylase complex subunit SAP130 isoform X1

  3. XM_046923754.1 → XP_046779710.1  histone deacetylase complex subunit SAP130 isoform X3

RNA

  1. XR_006935516.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5F3U0.1 GenPept UniProtKB/Swiss-Prot:Q5F3U0

Gene LinkOut

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