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VCPKMT valosin containing protein lysine methyltransferase [ Gallus gallus (chicken) ]

Gene ID: 423571, updated on 17-Aug-2024

Summary

Official Symbol
VCPKMTprovided by CGNC
Official Full Name
valosin containing protein lysine methyltransferaseprovided by CGNC
Primary source
CGNC:9319
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
METTL21D; C14orf138
Orthologs
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Genomic context

See VCPKMT in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (57476117..57479379, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (57351409..57354671, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor 6 Neighboring gene microRNA 1716 Neighboring gene SOS Ras/Rho guanine nucleotide exchange factor 2 Neighboring gene L-2-hydroxyglutarate dehydrogenase

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-lysine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine methylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
protein N-lysine methyltransferase METTL21D
Names
methyltransferase like 21D
valosin containing protein lysine (K) methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    57476117..57479379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_421460.7XP_421460.4  protein N-lysine methyltransferase METTL21D isoform X1

  2. XM_004936493.4XP_004936550.2  protein N-lysine methyltransferase METTL21D isoform X2

  3. XM_040701812.2XP_040557746.2  protein N-lysine methyltransferase METTL21D isoform X3

RNA

  1. XR_001463717.4 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    57351409..57354671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040672849.2XP_040528783.2  protein N-lysine methyltransferase METTL21D isoform X1

  2. XM_040672850.2XP_040528784.2  protein N-lysine methyltransferase METTL21D isoform X2

  3. XM_040672851.2XP_040528785.2  protein N-lysine methyltransferase METTL21D isoform X3

RNA

  1. XR_005850543.2 RNA Sequence