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PTPN5 protein tyrosine phosphatase, non-receptor type 5 [ Gallus gallus (chicken) ]

Gene ID: 423085, updated on 10-Oct-2024

Summary

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Symbol
PTPN5provided by CGNC
Full Name
protein tyrosine phosphatase, non-receptor type 5provided by CGNC
Primary source
CGNC:4794
See related
Ensembl:ENSGALG00010024540
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PTPN5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (12285850..12374904, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (12254440..12343502, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053392 Neighboring gene uncharacterized LOC124418029 Neighboring gene transmembrane protein 86A Neighboring gene protein tyrosine phosphatase, receptor type J Neighboring gene oxysterol binding protein like 5 Neighboring gene uncharacterized LOC124418030 Neighboring gene uncharacterized LOC121111038

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 5
Names
protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
XP_025006705.1
XP_025006714.1
XP_040529886.1
XP_040529889.1
XP_040529894.1
XP_040529895.1
XP_040529896.1
XP_040557308.1
XP_040557313.1
XP_040557314.1
XP_046775519.1
XP_046775520.1
XP_046775521.1
XP_046775522.1
XP_046775523.1
XP_046775524.1
XP_046775525.1
XP_046775527.1
XP_046775528.1
XP_046797979.1
XP_046797980.1
XP_046797981.1
XP_046797982.1
XP_046797983.1
XP_046797984.1
XP_046797985.1
XP_046797986.1
XP_046797987.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    12285850..12374904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046942031.1 → XP_046797987.1  tyrosine-protein phosphatase non-receptor type 5 isoform X3

  2. XM_046942023.1 → XP_046797979.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  3. XM_046942030.1 → XP_046797986.1  tyrosine-protein phosphatase non-receptor type 5 isoform X3

  4. XM_040701374.2 → XP_040557308.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  5. XM_025150937.3 → XP_025006705.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Related
    ENSGALP00010036620.1, ENSGALT00010059860.1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  6. XM_046942024.1 → XP_046797980.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  7. XM_046942026.1 → XP_046797982.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  8. XM_046942028.1 → XP_046797984.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  9. XM_040701379.2 → XP_040557313.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  10. XM_040701380.2 → XP_040557314.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  11. XM_046942027.1 → XP_046797983.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  12. XM_046942025.1 → XP_046797981.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  13. XM_025150946.3 → XP_025006714.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  14. XM_046942029.1 → XP_046797985.1  tyrosine-protein phosphatase non-receptor type 5 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    12254440..12343502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046919572.1 → XP_046775528.1  tyrosine-protein phosphatase non-receptor type 5 isoform X3

  2. XM_046919563.1 → XP_046775519.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  3. XM_046919571.1 → XP_046775527.1  tyrosine-protein phosphatase non-receptor type 5 isoform X3

  4. XM_040673955.2 → XP_040529889.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  5. XM_040673952.2 → XP_040529886.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  6. XM_046919564.1 → XP_046775520.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  7. XM_046919566.1 → XP_046775522.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  8. XM_046919568.1 → XP_046775524.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  9. XM_040673960.2 → XP_040529894.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  10. XM_040673961.2 → XP_040529895.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  11. XM_046919567.1 → XP_046775523.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  12. XM_046919565.1 → XP_046775521.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

  13. XM_040673962.2 → XP_040529896.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A5N1
    Conserved Domains (1) summary
    cd14613
    Location:258 → 515
    PTPc-N5; catalytic domain of tyrosine-protein phosphatase non-receptor type 5

  14. XM_046919569.1 → XP_046775525.1  tyrosine-protein phosphatase non-receptor type 5 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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