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FAR1 fatty acyl-CoA reductase 1 [ Gallus gallus (chicken) ]

Gene ID: 423028, updated on 10-Oct-2024

Summary

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Symbol
FAR1provided by CGNC
Full Name
fatty acyl-CoA reductase 1provided by CGNC
Primary source
CGNC:51877
See related
Ensembl:ENSGALG00010021623
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
MLSTD2
Orthologs
human mouse all
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Genomic context

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See FAR1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (7124161..7208003, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (7092739..7176706, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene olfactomedin like 1 Neighboring gene PPFIA binding protein 2 Neighboring gene cytochrome b5 reductase 2 Neighboring gene ovochymase 2 Neighboring gene BTB domain containing 10 Neighboring gene parathyroid hormone Neighboring gene uncharacterized LOC121110985 Neighboring gene aryl hydrocarbon receptor nuclear translocator like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fatty acyl-CoA reductases of birds. Hellenbrand J, et al. BMC Biochem, 2011 Dec 12. PMID 22151413, Free PMC Article
  2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alcohol-forming very long-chain fatty acyl-CoA reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acyl-CoA reductase 1
Names
male sterility domain containing 2
male sterility domain-containing protein 2
NP_001026350.1
XP_015141845.1
XP_015141848.1
XP_040556741.1
XP_040556742.1
XP_040556743.1
XP_040556744.1
XP_040556745.1
XP_040556746.1
XP_040556747.1
XP_046774072.1
XP_046774073.1
XP_046774074.1
XP_046774075.1
XP_046774076.1
XP_046774077.1
XP_046774078.1
XP_046774079.1
XP_046774080.1
XP_046774081.1
XP_046774082.1
XP_046797552.1
XP_046797553.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031179.2 → NP_001026350.1  fatty acyl-CoA reductase 1

    See identical proteins and their annotated locations for NP_001026350.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000214
    UniProtKB/Swiss-Prot
    Q5ZM72
    UniProtKB/TrEMBL
    A0A8V0ZJA9
    Related
    ENSGALP00010031441.1, ENSGALT00010052534.1
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7124161..7208003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015286362.4 → XP_015141848.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72
    UniProtKB/TrEMBL
    A0A8V0ZJA9
    Related
    ENSGALP00010031446.1, ENSGALT00010052540.1
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  2. XM_015286359.4 → XP_015141845.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72
    UniProtKB/TrEMBL
    A0A8V0ZJA9
    Related
    ENSGALP00010031435.1, ENSGALT00010052528.1
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  3. XM_040700807.2 → XP_040556741.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72
    UniProtKB/TrEMBL
    A0A8V0ZJA9
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  4. XM_040700809.2 → XP_040556743.1  fatty acyl-CoA reductase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZJA9, A0A8V0ZKW6
    Related
    ENSGALP00010031443.1, ENSGALT00010052536.1
    Conserved Domains (2) summary
    cd09071
    Location:355 → 446
    FAR_C; C-terminal domain of fatty acyl CoA reductases
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs

  5. XM_040700808.2 → XP_040556742.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72
    UniProtKB/TrEMBL
    A0A8V0ZJA9
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  6. XM_040700810.2 → XP_040556744.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72
    UniProtKB/TrEMBL
    A0A8V0ZJA9
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  7. XM_040700811.2 → XP_040556745.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72
    UniProtKB/TrEMBL
    A0A8V0ZJA9
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  8. XM_046941596.1 → XP_046797552.1  fatty acyl-CoA reductase 1 isoform X3

  9. XM_040700813.2 → XP_040556747.1  fatty acyl-CoA reductase 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZKU6
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  10. XM_040700812.2 → XP_040556746.1  fatty acyl-CoA reductase 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZKU6
    Conserved Domains (2) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  11. XM_046941597.1 → XP_046797553.1  fatty acyl-CoA reductase 1 isoform X3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7092739..7176706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046918118.1 → XP_046774074.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72

  2. XM_046918117.1 → XP_046774073.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72

  3. XM_046918116.1 → XP_046774072.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72

  4. XM_046918120.1 → XP_046774076.1  fatty acyl-CoA reductase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZKW6

  5. XM_046918119.1 → XP_046774075.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72

  6. XM_046918121.1 → XP_046774077.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72

  7. XM_046918122.1 → XP_046774078.1  fatty acyl-CoA reductase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZM72

  8. XM_046918124.1 → XP_046774080.1  fatty acyl-CoA reductase 1 isoform X3

  9. XM_046918125.1 → XP_046774081.1  fatty acyl-CoA reductase 1 isoform X3

  10. XM_046918123.1 → XP_046774079.1  fatty acyl-CoA reductase 1 isoform X3

  11. XM_046918126.1 → XP_046774082.1  fatty acyl-CoA reductase 1 isoform X3

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZM72.1 GenPept UniProtKB/Swiss-Prot:Q5ZM72

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