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PGGHG protein-glucosylgalactosylhydroxylysine glucosidase [ Gallus gallus (chicken) ]

Gene ID: 422991, updated on 10-Oct-2024

Summary

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Symbol
PGGHGprovided by CGNC
Full Name
protein-glucosylgalactosylhydroxylysine glucosidaseprovided by CGNC
Primary source
CGNC:3111
See related
Ensembl:ENSGALG00010020839
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
ATHL1
Orthologs
human mouse all
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Genomic context

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See PGGHG in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (1783230..1793775, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (1777984..1788529, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene dispanin subfamily A member 2b-like Neighboring gene interferon induced transmembrane protein 5 Neighboring gene uncharacterized LOC101749471 Neighboring gene proteasome 26S subunit, non-ATPase 13 Neighboring gene sirtuin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Catalytic site of human protein-glucosylgalactosylhydroxylysine glucosidase: Three crucial carboxyl residues were determined by cloning and site-directed mutagenesis. Hamazaki H, et al. Biochem Biophys Res Commun, 2016 Jan 15. PMID 26682924
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-glucosylgalactosylhydroxylysine glucosidase
Names
ATH1, acid trehalase-like 1
acid trehalase-like protein 1
NP_001305330.2
NP_001384317.1
NP_001384318.1
XP_015141750.2
XP_015141751.2
XP_040556720.1
XP_046774023.1
XP_046774024.1
XP_046774025.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001318401.2 → NP_001305330.2  protein-glucosylgalactosylhydroxylysine glucosidase

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000212
    UniProtKB/TrEMBL
    A0A8V0Z911
    Conserved Domains (1) summary
    COG1554
    Location:17 → 643
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]

  2. NM_001397388.1 → NP_001384317.1  protein-glucosylgalactosylhydroxylysine glucosidase

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000212
    UniProtKB/TrEMBL
    A0A8V0Z911
    Conserved Domains (1) summary
    COG1554
    Location:17 → 643
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]

  3. NM_001397389.1 → NP_001384318.1  protein-glucosylgalactosylhydroxylysine glucosidase

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000212
    UniProtKB/TrEMBL
    A0A8V0Z911
    Related
    ENSGALP00010029765.1, ENSGALT00010050417.1
    Conserved Domains (1) summary
    COG1554
    Location:17 → 643
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1783230..1793775 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015286264.4 → XP_015141750.2  protein-glucosylgalactosylhydroxylysine glucosidase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z911
    Conserved Domains (1) summary
    COG1554
    Location:17 → 643
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]

  2. XM_015286265.4 → XP_015141751.2  protein-glucosylgalactosylhydroxylysine glucosidase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z911
    Conserved Domains (1) summary
    COG1554
    Location:17 → 643
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]

  3. XM_040700786.1 → XP_040556720.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z911
    Conserved Domains (1) summary
    COG1554
    Location:17 → 643
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1777984..1788529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046918067.1 → XP_046774023.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X1

  2. XM_046918068.1 → XP_046774024.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X1

  3. XM_046918069.1 → XP_046774025.1  protein-glucosylgalactosylhydroxylysine glucosidase isoform X1

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F1NZI4.3 GenPept UniProtKB/Swiss-Prot:F1NZI4

Gene LinkOut

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