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GUF1 GUF1 homolog, GTPase [ Gallus gallus (chicken) ]

Gene ID: 422773, updated on 17-Aug-2024

Summary

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Symbol
GUF1provided by CGNC
Full Name
GUF1 homolog, GTPaseprovided by CGNC
Primary source
CGNC:10596
See related
Ensembl:ENSGALG00010013823
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See GUF1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (67111478..67135060, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (67095546..67119137, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type A receptor alpha2 subunit Neighboring gene gamma-aminobutyric acid type A receptor gamma1 subunit Neighboring gene glucosamine-6-phosphate deaminase 2 Neighboring gene Yip1 domain family member 7 Neighboring gene potassium channel tetramerization domain containing 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mitochondrial ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
translation factor GUF1, mitochondrial
Names
GTP-binding protein GUF1 homolog
GUF1 GTPase homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    67111478..67135060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040699336.2 → XP_040555270.1  translation factor GUF1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0YFJ1, A0A8V0YLX8
    Related
    ENSGALP00010019606.1, ENSGALT00010033181.1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 655
    PRK05433; GTP-binding protein LepA; Provisional

  2. XM_001232469.7 → XP_001232470.2  translation factor GUF1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0YFJ1, A0A8V0YLX8
    Related
    ENSGALP00010019613.1, ENSGALT00010033195.1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 655
    PRK05433; GTP-binding protein LepA; Provisional

  3. XM_025150067.3 → XP_025005835.2  translation factor GUF1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0YFJ1, A0A8V0YLX8
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 655
    PRK05433; GTP-binding protein LepA; Provisional

  4. XM_040699337.2 → XP_040555271.1  translation factor GUF1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 615
    PRK05433; GTP-binding protein LepA; Provisional

  5. XM_025150070.2 → XP_025005838.1  translation factor GUF1, mitochondrial isoform X4

    Conserved Domains (1) summary
    PRK05433
    Location:1 → 340
    PRK05433; GTP-binding protein LepA; Provisional

  6. XM_040699339.2 → XP_040555273.1  translation factor GUF1, mitochondrial isoform X4

    Conserved Domains (1) summary
    PRK05433
    Location:1 → 340
    PRK05433; GTP-binding protein LepA; Provisional

  7. XM_040699338.2 → XP_040555272.1  translation factor GUF1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 615
    PRK05433; GTP-binding protein LepA; Provisional

  8. XM_015285479.4 → XP_015140965.2  translation factor GUF1, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 563
    PRK05433; GTP-binding protein LepA; Provisional

RNA

  1. XR_005859216.2 RNA Sequence

  2. XR_005859211.2 RNA Sequence

  3. XR_001466318.4 RNA Sequence

  4. XR_001466316.4 RNA Sequence

  5. XR_005859215.2 RNA Sequence

  6. XR_005859213.2 RNA Sequence

  7. XR_005859214.2 RNA Sequence

  8. XR_003074884.3 RNA Sequence

  9. XR_003074885.3 RNA Sequence

  10. XR_005859212.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    67095546..67119137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040670186.2 → XP_040526120.1  translation factor GUF1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 655
    PRK05433; GTP-binding protein LepA; Provisional

  2. XM_040670185.2 → XP_040526119.1  translation factor GUF1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 655
    PRK05433; GTP-binding protein LepA; Provisional

  3. XM_040670184.2 → XP_040526118.1  translation factor GUF1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 655
    PRK05433; GTP-binding protein LepA; Provisional

  4. XM_040670187.2 → XP_040526121.1  translation factor GUF1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 615
    PRK05433; GTP-binding protein LepA; Provisional

  5. XM_040670190.1 → XP_040526124.1  translation factor GUF1, mitochondrial isoform X4

    Conserved Domains (1) summary
    PRK05433
    Location:1 → 340
    PRK05433; GTP-binding protein LepA; Provisional

  6. XM_040670191.2 → XP_040526125.1  translation factor GUF1, mitochondrial isoform X4

    Conserved Domains (1) summary
    PRK05433
    Location:1 → 340
    PRK05433; GTP-binding protein LepA; Provisional

  7. XM_040670188.2 → XP_040526122.1  translation factor GUF1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 615
    PRK05433; GTP-binding protein LepA; Provisional

  8. XM_040670189.2 → XP_040526123.1  translation factor GUF1, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8V0YFJ1
    Conserved Domains (1) summary
    PRK05433
    Location:55 → 563
    PRK05433; GTP-binding protein LepA; Provisional

RNA

  1. XR_005849303.2 RNA Sequence

  2. XR_005849296.2 RNA Sequence

  3. XR_005849295.2 RNA Sequence

  4. XR_005849299.2 RNA Sequence

  5. XR_005849302.2 RNA Sequence

  6. XR_005849300.2 RNA Sequence

  7. XR_005849301.2 RNA Sequence

  8. XR_005849298.2 RNA Sequence

  9. XR_005849304.2 RNA Sequence

  10. XR_005849297.2 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001006455.1: Suppressed sequence

    Description
    NM_001006455.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: FLJ13220 (GeneID:60558).
Nucleotide Protein Strain
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