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LRP2BP LRP2 binding protein [ Gallus gallus (chicken) ]

Gene ID: 422543, updated on 17-Aug-2024

Summary

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Symbol
LRP2BPprovided by CGNC
Full Name
LRP2 binding proteinprovided by CGNC
Primary source
CGNC:8052
See related
Ensembl:ENSGALG00010005826
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See LRP2BP in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (38829955..38839649)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (38779302..38787653)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene tachykinin receptor 3 Neighboring gene UFM1 specific peptidase 2 Neighboring gene sorting nexin 25 Neighboring gene uncharacterized LOC121110734 Neighboring gene cilia and flagella associated protein 97

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LRP2-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    38829955..38839649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015276563.4 → XP_015132049.2  LRP2-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0XNB1
    Related
    ENSGALP00010008187.1, ENSGALT00010013875.1
    Conserved Domains (3) summary
    smart00671
    Location:274 → 305
    SEL1; Sel1-like repeats
    COG0790
    Location:7 → 237
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:89 → 125
    SLR; SLR repeat [structural motif]

  2. XM_015276565.4 → XP_015132051.2  LRP2-binding protein isoform X3

    UniProtKB/TrEMBL
    A0A8V0XNB1
    Conserved Domains (3) summary
    smart00671
    Location:236 → 267
    SEL1; Sel1-like repeats
    COG0790
    Location:27 → 199
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:53 → 87
    SLR; SLR repeat [structural motif]

  3. XM_040699644.1 → XP_040555578.1  LRP2-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0XNB1, A0A8V0XT89
    Related
    ENSGALP00010008191.1, ENSGALT00010013879.1
    Conserved Domains (3) summary
    smart00671
    Location:283 → 314
    SEL1; Sel1-like repeats
    COG0790
    Location:58 → 246
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:98 → 134
    SLR; SLR repeat [structural motif]

  4. XM_040699641.1 → XP_040555575.1  LRP2-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0XNB1, A0A8V0XT89
    Conserved Domains (3) summary
    smart00671
    Location:283 → 314
    SEL1; Sel1-like repeats
    COG0790
    Location:58 → 246
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:98 → 134
    SLR; SLR repeat [structural motif]

  5. XM_040699643.1 → XP_040555577.1  LRP2-binding protein isoform X4

    Conserved Domains (3) summary
    smart00671
    Location:228 → 259
    SEL1; Sel1-like repeats
    COG0790
    Location:61 → 191
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:45 → 79
    SLR; SLR repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    38779302..38787653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040671345.2 → XP_040527279.1  LRP2-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0XNB1
    Conserved Domains (3) summary
    smart00671
    Location:274 → 305
    SEL1; Sel1-like repeats
    COG0790
    Location:7 → 237
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:89 → 125
    SLR; SLR repeat [structural motif]

  2. XM_040671346.2 → XP_040527280.1  LRP2-binding protein isoform X3

    UniProtKB/TrEMBL
    A0A8V0XNB1
    Conserved Domains (3) summary
    smart00671
    Location:236 → 267
    SEL1; Sel1-like repeats
    COG0790
    Location:27 → 199
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:53 → 87
    SLR; SLR repeat [structural motif]

  3. XM_040671348.1 → XP_040527282.1  LRP2-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0XNB1, A0A8V0XT89
    Conserved Domains (3) summary
    smart00671
    Location:283 → 314
    SEL1; Sel1-like repeats
    COG0790
    Location:58 → 246
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:98 → 134
    SLR; SLR repeat [structural motif]

  4. XM_040671343.1 → XP_040527277.1  LRP2-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0XNB1, A0A8V0XT89
    Conserved Domains (3) summary
    smart00671
    Location:283 → 314
    SEL1; Sel1-like repeats
    COG0790
    Location:58 → 246
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:98 → 134
    SLR; SLR repeat [structural motif]

  5. XM_040671347.1 → XP_040527281.1  LRP2-binding protein isoform X4

    Conserved Domains (3) summary
    smart00671
    Location:228 → 259
    SEL1; Sel1-like repeats
    COG0790
    Location:61 → 191
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:45 → 79
    SLR; SLR repeat [structural motif]
Nucleotide Protein
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