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ELF2 E74 like ETS transcription factor 2 [ Gallus gallus (chicken) ]

Gene ID: 422439, updated on 17-Aug-2024

Summary

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Symbol
ELF2provided by CGNC
Full Name
E74 like ETS transcription factor 2provided by CGNC
Primary source
CGNC:7427
See related
Ensembl:ENSGALG00010010009
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ELF2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (28790583..28819340, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (28742461..28771233, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101751121 Neighboring gene nocturnin Neighboring gene mitochondria localized glutamic acid rich protein Neighboring gene N(alpha)-acetyltransferase 15, NatA auxiliary subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS-related transcription factor Elf-2
Names
E74-like factor 2 (ets domain transcription factor)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    28790583..28819340 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040700447.2 → XP_040556381.1  ETS-related transcription factor Elf-2 isoform X2

    Conserved Domains (1) summary
    pfam00178
    Location:105 → 185
    Ets; Ets-domain

  2. XM_004940937.5 → XP_004940994.1  ETS-related transcription factor Elf-2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5NTD6
    Conserved Domains (2) summary
    pfam00178
    Location:209 → 289
    Ets; Ets-domain
    pfam12310
    Location:3 → 108
    Elf-1_N; Transcription factor protein N terminal

  3. XM_040700445.2 → XP_040556379.1  ETS-related transcription factor Elf-2 isoform X1

    Conserved Domains (2) summary
    pfam00178
    Location:209 → 289
    Ets; Ets-domain
    pfam12310
    Location:3 → 108
    Elf-1_N; Transcription factor protein N terminal

  4. XM_015276701.4 → XP_015132187.1  ETS-related transcription factor Elf-2 isoform X3

    UniProtKB/TrEMBL
    E1C717
    Related
    ENSGALP00010013621.1, ENSGALT00010023809.1
    Conserved Domains (2) summary
    pfam00178
    Location:149 → 229
    Ets; Ets-domain
    pfam12310
    Location:20 → 48
    Elf-1_N; Transcription factor protein N terminal

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    28742461..28771233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040671794.2 → XP_040527728.1  ETS-related transcription factor Elf-2 isoform X2

    Conserved Domains (1) summary
    pfam00178
    Location:105 → 185
    Ets; Ets-domain

  2. XM_040671792.2 → XP_040527726.1  ETS-related transcription factor Elf-2 isoform X1

    Conserved Domains (2) summary
    pfam00178
    Location:209 → 289
    Ets; Ets-domain
    pfam12310
    Location:3 → 108
    Elf-1_N; Transcription factor protein N terminal

  3. XM_040671791.2 → XP_040527725.1  ETS-related transcription factor Elf-2 isoform X1

    Conserved Domains (2) summary
    pfam00178
    Location:209 → 289
    Ets; Ets-domain
    pfam12310
    Location:3 → 108
    Elf-1_N; Transcription factor protein N terminal

  4. XM_040671795.2 → XP_040527729.1  ETS-related transcription factor Elf-2 isoform X3

    UniProtKB/TrEMBL
    E1C717
    Conserved Domains (2) summary
    pfam00178
    Location:149 → 229
    Ets; Ets-domain
    pfam12310
    Location:20 → 48
    Elf-1_N; Transcription factor protein N terminal

  5. XM_046916850.1 → XP_046772806.1  ETS-related transcription factor Elf-2 isoform X4

Nucleotide Protein
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