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RAB9B RAB9B, member RAS oncogene family [ Gallus gallus (chicken) ]

Gene ID: 422187, updated on 10-Oct-2024

Summary

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Symbol
RAB9Bprovided by CGNC
Full Name
RAB9B, member RAS oncogene familyprovided by CGNC
Primary source
CGNC:3651
See related
Ensembl:ENSGALG00010016473
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RAB9B in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (1946498..1951685)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (1982987..1988168)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene phosphoribosyl pyrophosphate synthetase 1-like 1 Neighboring gene thymosin beta 15B Neighboring gene proteolipid protein 1 Neighboring gene glycine receptor alpha 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-9B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001389488.2 → NP_001376417.1  ras-related protein Rab-9B

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000071
    UniProtKB/TrEMBL
    A0A3Q2UG55, A0A8V0YWI0
    Related
    ENSGALP00010022960.1, ENSGALT00010039701.1
    Conserved Domains (1) summary
    cd04116
    Location:3 → 172
    Rab9; Rab GTPase family 9 (Rab9)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1946498..1951685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015278387.4 → XP_015133873.1  ras-related protein Rab-9B isoform X1

    UniProtKB/TrEMBL
    A0A3Q2UG55, A0A8V0YWI0
    Related
    ENSGALP00010022947.1, ENSGALT00010039688.1
    Conserved Domains (1) summary
    cd04116
    Location:3 → 172
    Rab9; Rab GTPase family 9 (Rab9)

  2. XM_040698781.2 → XP_040554715.1  ras-related protein Rab-9B isoform X1

    UniProtKB/TrEMBL
    A0A3Q2UG55, A0A8V0YWI0
    Related
    ENSGALP00010022964.1, ENSGALT00010039705.1
    Conserved Domains (1) summary
    cd04116
    Location:3 → 172
    Rab9; Rab GTPase family 9 (Rab9)

  3. XM_001232251.6 → XP_001232252.1  ras-related protein Rab-9B isoform X1

    See identical proteins and their annotated locations for XP_001232252.1

    UniProtKB/TrEMBL
    A0A3Q2UG55, A0A8V0YWI0
    Related
    ENSGALP00010022981.1, ENSGALT00010039724.1
    Conserved Domains (1) summary
    cd04116
    Location:3 → 172
    Rab9; Rab GTPase family 9 (Rab9)

  4. XM_001232273.6 → XP_001232274.1  ras-related protein Rab-9B isoform X1

    See identical proteins and their annotated locations for XP_001232274.1

    UniProtKB/TrEMBL
    A0A3Q2UG55, A0A8V0YWI0
    Related
    ENSGALP00010022969.1, ENSGALT00010039710.1
    Conserved Domains (1) summary
    cd04116
    Location:3 → 172
    Rab9; Rab GTPase family 9 (Rab9)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1982987..1988168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046915698.1 → XP_046771654.1  ras-related protein Rab-9B isoform X1

    UniProtKB/TrEMBL
    A0A3Q2UG55

  2. XM_046915702.1 → XP_046771658.1  ras-related protein Rab-9B isoform X1

    UniProtKB/TrEMBL
    A0A3Q2UG55

  3. XM_046915701.1 → XP_046771657.1  ras-related protein Rab-9B isoform X1

    UniProtKB/TrEMBL
    A0A3Q2UG55

  4. XM_046915699.1 → XP_046771655.1  ras-related protein Rab-9B isoform X1

    UniProtKB/TrEMBL
    A0A3Q2UG55
Nucleotide Protein Strain
Heading Accession and Version

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