U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GPN1 GPN-loop GTPase 1 [ Gallus gallus (chicken) ]

Gene ID: 421980, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Symbol
GPN1provided by CGNC
Full Name
GPN-loop GTPase 1provided by CGNC
Primary source
CGNC:12361
See related
Ensembl:ENSGALG00010008790
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
XAB1
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GPN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (104130107..104144292, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (103890590..103904477, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene tumor protein p53 inducible protein 3 Neighboring gene family with sequence similarity 228 Neighboring gene intersectin 2 Neighboring gene uncharacterized LOC121110413 Neighboring gene zinc finger protein 512 Neighboring gene numb homolog (Drosophila)-like Neighboring gene fibronectin type III domain containing 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPN-loop GTPase 1
Names
XPA binding protein 1, GTPase
XP_040524165.1
XP_040524166.1
XP_419990.3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    104130107..104144292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_419990.4 → XP_419990.3  GPN-loop GTPase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y3H2
    Related
    ENSGALP00010012006.1, ENSGALT00010020854.1
    Conserved Domains (1) summary
    cd17870
    Location:112 → 350
    GPN1; GPN-loop GTPase 1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    103890590..103904477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040668231.2 → XP_040524165.1  GPN-loop GTPase 1 isoform X2

    Conserved Domains (1) summary
    cd17870
    Location:12 → 250
    GPN1; GPN-loop GTPase 1

  2. XM_040668232.1 → XP_040524166.1  GPN-loop GTPase 1 isoform X3

    Conserved Domains (1) summary
    cd17870
    Location:6 → 162
    GPN1; GPN-loop GTPase 1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.