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HBS1L HBS1 like translational GTPase [ Gallus gallus (chicken) ]

Gene ID: 421694, updated on 10-Oct-2024

Summary

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Symbol
HBS1Lprovided by CGNC
Full Name
HBS1 like translational GTPaseprovided by CGNC
Primary source
CGNC:10439
See related
Ensembl:ENSGALG00010004639
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See HBS1L in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (55443998..55509187)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (55349841..55415148)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene splicing factor, proline- and glutamine-rich-like Neighboring gene Abelson helper integration site 1 Neighboring gene uncharacterized LOC112532083 Neighboring gene MYB proto-oncogene, transcription factor Neighboring gene uncharacterized LOC112532123 Neighboring gene aldehyde dehydrogenase 8 family member A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HBS1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    55443998..55509187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001234090.7 → XP_001234091.3  HBS1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0XDL1, A0A8V0XPY1
    Related
    ENSGALP00010006218.1, ENSGALT00010010810.1
    Conserved Domains (2) summary
    COG5256
    Location:317 → 745
    TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
    pfam08938
    Location:55 → 130
    HBS1_N; HBS1 N-terminus

  2. XM_015284167.4 → XP_015139653.1  HBS1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0XDL1, E1BW59
    Related
    ENSGALP00010006220.1, ENSGALT00010010822.1
    Conserved Domains (2) summary
    COG5256
    Location:259 → 687
    TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
    pfam08938
    Location:55 → 130
    HBS1_N; HBS1 N-terminus

  3. XM_046939184.1 → XP_046795140.1  HBS1-like protein isoform X3

  4. XM_046939185.1 → XP_046795141.1  HBS1-like protein isoform X4

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    55349841..55415148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040667836.2 → XP_040523770.1  HBS1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0XDL1, A0A8V0XPY1
    Conserved Domains (2) summary
    COG5256
    Location:317 → 745
    TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
    pfam08938
    Location:55 → 130
    HBS1_N; HBS1 N-terminus

  2. XM_040667837.2 → XP_040523771.1  HBS1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0XDL1, E1BW59
    Conserved Domains (2) summary
    COG5256
    Location:259 → 687
    TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
    pfam08938
    Location:55 → 130
    HBS1_N; HBS1 N-terminus

  3. XM_046915206.1 → XP_046771162.1  HBS1-like protein isoform X3

  4. XM_046915207.1 → XP_046771163.1  HBS1-like protein isoform X4

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001031073.1: Suppressed sequence

    Description
    NM_001031073.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
Nucleotide Protein Strain
Heading Accession and Version

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