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ABHD12 abhydrolase domain containing 12 [ Gallus gallus (chicken) ]

Gene ID: 421249, updated on 10-Oct-2024

Summary

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Symbol
ABHD12provided by CGNC
Full Name
abhydrolase domain containing 12provided by CGNC
Primary source
CGNC:6467
See related
Ensembl:ENSGALG00010018399
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

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See ABHD12 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (4388495..4416487, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (4311785..4339829, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121113168 Neighboring gene Ras and Rab interactor 2 Neighboring gene phosphorylase, glycogen; brain Neighboring gene protein phosphatase 2 regulatory subunit B'delta Neighboring gene kelch domain containing 3 Neighboring gene male-enhanced antigen 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monoacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoacylglycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylserine lipase ABHD12
Names
2-arachidonoylglycerol hydrolase ABHD12
abhydrolase domain-containing protein 12
monoacylglycerol lipase ABHD12
oxidized phosphatidylserine lipase ABHD12
NP_001012889.1
XP_015138860.2
XP_040552940.1
XP_046769517.1
XP_046769518.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012871.2 → NP_001012889.1  lysophosphatidylserine lipase ABHD12

    See identical proteins and their annotated locations for NP_001012889.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000060
    UniProtKB/Swiss-Prot
    Q5ZIN0
    UniProtKB/TrEMBL
    A0A8V0Z6A2
    Related
    ENSGALP00010026455.1, ENSGALT00010044452.1
    Conserved Domains (1) summary
    pfam12146
    Location:148 → 341
    Hydrolase_4; Serine aminopeptidase, S33

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4388495..4416487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040697006.2 → XP_040552940.1  lysophosphatidylserine lipase ABHD12 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z6A2, A0A8V0Z6A7
    Related
    ENSGALP00010026460.1, ENSGALT00010044457.1
    Conserved Domains (1) summary
    COG2267
    Location:89 → 290
    PldB; Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism]

  2. XM_015283374.4 → XP_015138860.2  lysophosphatidylserine lipase ABHD12 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YZM0, A0A8V0Z6A2
    Related
    ENSGALP00010026451.1, ENSGALT00010044441.1
    Conserved Domains (1) summary
    COG2267
    Location:92 → 293
    PldB; Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4311785..4339829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046913562.1 → XP_046769518.1  lysophosphatidylserine lipase ABHD12 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z6A7

  2. XM_046913561.1 → XP_046769517.1  lysophosphatidylserine lipase ABHD12 isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZIN0.1 GenPept UniProtKB/Swiss-Prot:Q5ZIN0

Gene LinkOut

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