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LZTR1 leucine zipper like transcription regulator 1 [ Gallus gallus (chicken) ]

Gene ID: 421166, updated on 17-Aug-2024

Summary

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Symbol
LZTR1provided by CGNC
Full Name
leucine zipper like transcription regulator 1provided by CGNC
Primary source
CGNC:66394
See related
Ensembl:ENSGALG00010026117
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See LZTR1 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
21
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (632466..652061)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (601701..621305)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene lysine demethylase 5B Neighboring gene importin 9 Neighboring gene arginyl aminopeptidase Neighboring gene neuron navigator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-zipper-like transcriptional regulator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    632466..652061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040652791.2 → XP_040508725.1  leucine-zipper-like transcriptional regulator 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AAH5
    Conserved Domains (6) summary
    PLN02153
    Location:60 → 357
    PLN02153; epithiospecifier protein
    sd00038
    Location:60 → 106
    Kelch; KELCH repeat [structural motif]
    cd18308
    Location:360 → 517
    BTB1_POZ_LZTR1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18309
    Location:593 → 718
    BTB2_POZ_LZTR1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18505
    Location:521 → 579
    BACK1_LZTR1; first BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18506
    Location:714 → 748
    BACK2_LZTR1; second BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)

  2. XM_025143929.3 → XP_024999697.2  leucine-zipper-like transcriptional regulator 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P134, A0A8V1AAH5
    Related
    ENSGALP00010039277.1, ENSGALT00010063629.1
    Conserved Domains (6) summary
    PLN02153
    Location:60 → 357
    PLN02153; epithiospecifier protein
    sd00038
    Location:60 → 106
    Kelch; KELCH repeat [structural motif]
    cd18308
    Location:360 → 517
    BTB1_POZ_LZTR1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18309
    Location:593 → 718
    BTB2_POZ_LZTR1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18505
    Location:521 → 579
    BACK1_LZTR1; first BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18506
    Location:714 → 774
    BACK2_LZTR1; second BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    601701..621305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691305.2 → XP_040547239.1  leucine-zipper-like transcriptional regulator 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AAH5
    Conserved Domains (6) summary
    PLN02153
    Location:60 → 357
    PLN02153; epithiospecifier protein
    sd00038
    Location:60 → 106
    Kelch; KELCH repeat [structural motif]
    cd18308
    Location:360 → 517
    BTB1_POZ_LZTR1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18309
    Location:593 → 718
    BTB2_POZ_LZTR1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18505
    Location:521 → 579
    BACK1_LZTR1; first BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18506
    Location:714 → 748
    BACK2_LZTR1; second BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)

  2. XM_040691304.2 → XP_040547238.1  leucine-zipper-like transcriptional regulator 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AAH5
    Conserved Domains (6) summary
    PLN02153
    Location:60 → 357
    PLN02153; epithiospecifier protein
    sd00038
    Location:60 → 106
    Kelch; KELCH repeat [structural motif]
    cd18308
    Location:360 → 517
    BTB1_POZ_LZTR1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18309
    Location:593 → 718
    BTB2_POZ_LZTR1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18505
    Location:521 → 579
    BACK1_LZTR1; first BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
    cd18506
    Location:714 → 774
    BACK2_LZTR1; second BACK (BTB and C-terminal Kelch) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1)
Nucleotide Protein
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