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RNF144B ring finger protein 144B [ Gallus gallus (chicken) ]

Gene ID: 420827, updated on 17-Aug-2024

Summary

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Symbol
RNF144Bprovided by CGNC
Full Name
ring finger protein 144Bprovided by CGNC
Primary source
CGNC:9622
See related
Ensembl:ENSGALG00010007433
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
IBRDC2
Orthologs
human mouse all
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Genomic context

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See RNF144B in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (59963370..60052523, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (59913392..60002793, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109682 Neighboring gene uncharacterized LOC124418173 Neighboring gene uncharacterized LOC124417796 Neighboring gene DEK proto-oncogene Neighboring gene lysine demethylase 1B Neighboring gene thiopurine S-methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF144B
Names
IBR domain containing 2
ring finger 144B
XP_004939680.1
XP_015131438.1
XP_040519563.1
XP_040519564.1
XP_040519566.1
XP_046768737.1
XP_046768738.1
XP_046768739.1
XP_046783444.1
XP_046783470.1
XP_418918.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    59963370..60052523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015275952.4 → XP_015131438.1  E3 ubiquitin-protein ligase RNF144B isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y0Q7, E1BRG4
    Conserved Domains (3) summary
    smart00647
    Location:101 → 166
    IBR; In Between Ring fingers
    cd16778
    Location:28 → 84
    mRING-HC-C4C4_RBR_RNF144B; Modified RING finger, HC subclass (C4C4-type), found in RING finger protein 144B (RNF144B)
    pfam01485
    Location:184 → 224
    IBR; IBR domain, a half RING-finger domain

  2. XM_046927488.1 → XP_046783444.1  E3 ubiquitin-protein ligase RNF144B isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y0Q2
    Related
    ENSGALP00010009803.1, ENSGALT00010017730.1

  3. XM_418918.8 → XP_418918.3  E3 ubiquitin-protein ligase RNF144B isoform X3

    See identical proteins and their annotated locations for XP_418918.3

    UniProtKB/TrEMBL
    A0A8V0Y0Q7, E1BRG4
    Conserved Domains (3) summary
    smart00647
    Location:101 → 166
    IBR; In Between Ring fingers
    cd16778
    Location:28 → 84
    mRING-HC-C4C4_RBR_RNF144B; Modified RING finger, HC subclass (C4C4-type), found in RING finger protein 144B (RNF144B)
    pfam01485
    Location:184 → 224
    IBR; IBR domain, a half RING-finger domain

  4. XM_004939623.5 → XP_004939680.1  E3 ubiquitin-protein ligase RNF144B isoform X2

    UniProtKB/TrEMBL
    A0A8V0XXP7, A0A8V0Y0Q7
    Related
    ENSGALP00010009805.1, ENSGALT00010017732.1
    Conserved Domains (3) summary
    smart00647
    Location:120 → 185
    IBR; In Between Ring fingers
    cd16778
    Location:47 → 103
    mRING-HC-C4C4_RBR_RNF144B; Modified RING finger, HC subclass (C4C4-type), found in RING finger protein 144B (RNF144B)
    pfam01485
    Location:203 → 243
    IBR; IBR domain, a half RING-finger domain

  5. XM_046927514.1 → XP_046783470.1  E3 ubiquitin-protein ligase RNF144B isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y0Q7, E1BRG4
    Related
    ENSGALP00010009800.1, ENSGALT00010017725.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    59913392..60002793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046912782.1 → XP_046768738.1  E3 ubiquitin-protein ligase RNF144B isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y0Q7, E1BRG4

  2. XM_040663630.2 → XP_040519564.1  E3 ubiquitin-protein ligase RNF144B isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y0Q7, E1BRG4
    Conserved Domains (3) summary
    smart00647
    Location:101 → 166
    IBR; In Between Ring fingers
    cd16778
    Location:28 → 84
    mRING-HC-C4C4_RBR_RNF144B; Modified RING finger, HC subclass (C4C4-type), found in RING finger protein 144B (RNF144B)
    pfam01485
    Location:184 → 224
    IBR; IBR domain, a half RING-finger domain

  3. XM_046912781.1 → XP_046768737.1  E3 ubiquitin-protein ligase RNF144B isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y0Q2

  4. XM_040663632.2 → XP_040519566.1  E3 ubiquitin-protein ligase RNF144B isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y0Q7, E1BRG4
    Conserved Domains (3) summary
    smart00647
    Location:101 → 166
    IBR; In Between Ring fingers
    cd16778
    Location:28 → 84
    mRING-HC-C4C4_RBR_RNF144B; Modified RING finger, HC subclass (C4C4-type), found in RING finger protein 144B (RNF144B)
    pfam01485
    Location:184 → 224
    IBR; IBR domain, a half RING-finger domain

  5. XM_040663629.2 → XP_040519563.1  E3 ubiquitin-protein ligase RNF144B isoform X2

    UniProtKB/TrEMBL
    A0A8V0XXP7, A0A8V0Y0Q7
    Conserved Domains (3) summary
    smart00647
    Location:120 → 185
    IBR; In Between Ring fingers
    cd16778
    Location:47 → 103
    mRING-HC-C4C4_RBR_RNF144B; Modified RING finger, HC subclass (C4C4-type), found in RING finger protein 144B (RNF144B)
    pfam01485
    Location:203 → 243
    IBR; IBR domain, a half RING-finger domain

  6. XM_046912783.1 → XP_046768739.1  E3 ubiquitin-protein ligase RNF144B isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y0Q7, E1BRG4
Nucleotide Protein
Heading Accession and Version

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