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PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha [ Gallus gallus (chicken) ]

Gene ID: 420504, updated on 10-Oct-2024

Summary

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Symbol
PIP4K2Aprovided by CGNC
Full Name
phosphatidylinositol-5-phosphate 4-kinase type 2 alphaprovided by CGNC
Primary source
CGNC:5959
See related
Ensembl:ENSGALG00010004265
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
PIP5K2A
Orthologs
human mouse all
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Genomic context

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See PIP4K2A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (17422677..17554446)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (17443305..17582119)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene pancreas specific transcription factor, 1a Neighboring gene armadillo repeat containing 3 Neighboring gene uncharacterized LOC112531962 Neighboring gene sperm associated antigen 6 Neighboring gene microRNA mir-12240

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic tagging reveals a random association of endogenous PtdIns5P 4-kinases IIalpha and IIbeta and a partial nuclear localization of the IIalpha isoform. Wang M, et al. Biochem J, 2010 Sep 1. PMID 20569199, Free PMC Article
  2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Dimerization of PIP4K2B and PIP4K2A is complete and random, governed by the relative concentrations.
    Title: Genomic tagging reveals a random association of endogenous PtdIns5P 4-kinases IIalpha and IIbeta and a partial nuclear localization of the IIalpha isoform.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
Names
1-phosphatidylinositol 5-phosphate 4-kinase 2-alpha
PI(5)P 4-kinase type II alpha
PIP4KII-alpha
diphosphoinositide kinase 2-alpha
phosphatidylinositol-4-phosphate 5-kinase, type II, alpha
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
NP_001026142.2
XP_025002947.2
XP_025002949.1
XP_040536735.1
XP_046766950.1
XP_046766951.1
XP_046766952.1
XP_046766953.1
XP_046766954.1
XP_046766955.1
XP_046777865.1
XP_046777866.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030971.2 → NP_001026142.2  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000036
    UniProtKB/Swiss-Prot
    Q5F356
    Related
    ENSGALP00010005848.1, ENSGALT00010009990.1
    Conserved Domains (1) summary
    cd17309
    Location:26 → 402
    PIPKc_PIP5K2A; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha (PIP5K2A) and similar proteins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    17422677..17554446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040680801.1 → XP_040536735.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X4

    UniProtKB/TrEMBL
    A0A8V0XNR6
    Related
    ENSGALP00010005844.1, ENSGALT00010009983.1
    Conserved Domains (1) summary
    cl28923
    Location:1 → 344
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  2. XM_025147181.2 → XP_025002949.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X4

    UniProtKB/TrEMBL
    A0A8V0XNR6
    Conserved Domains (1) summary
    cl28923
    Location:1 → 344
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  3. XM_046921910.1 → XP_046777866.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X3

    UniProtKB/TrEMBL
    A0A8V0XJ96
    Related
    ENSGALP00010005845.1, ENSGALT00010009985.1

  4. XM_025147179.3 → XP_025002947.2  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X1

    Related
    ENSGALP00010005846.1, ENSGALT00010009987.1

  5. XM_046921909.1 → XP_046777865.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    17443305..17582119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046910999.1 → XP_046766955.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X4

  2. XM_046910998.1 → XP_046766954.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X4

  3. XM_046910996.1 → XP_046766952.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X3

    UniProtKB/TrEMBL
    A0A8V0XJ96

  4. XM_046910994.1 → XP_046766950.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X1

  5. XM_046910995.1 → XP_046766951.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X2

  6. XM_046910997.1 → XP_046766953.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X5

    UniProtKB/TrEMBL
    A0A8V0XGL3
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5F356.1 GenPept UniProtKB/Swiss-Prot:Q5F356

Gene LinkOut

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