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PIP5K1C phosphatidylinositol-4-phosphate 5-kinase, type I, gamma [ Gallus gallus (chicken) ]

Gene ID: 420072, updated on 10-Oct-2024

Summary

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Official Symbol
PIP5K1Cprovided by CGNC
Official Full Name
phosphatidylinositol-4-phosphate 5-kinase, type I, gammaprovided by CGNC
Primary source
CGNC:501
See related
Ensembl:ENSGALG00010028113
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PIP5K1C in Genome Data Viewer
Location:
chromosome: 28
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 28 NC_052559.1 (1417085..1450509)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 28 NC_052600.1 (989793..1023256)

Chromosome 28 - NC_052559.1Genomic Context describing neighboring genes Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 3 Neighboring gene tight junction protein 3 Neighboring gene cactin, spliceosome C complex subunit Neighboring gene thromboxane A2 receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Steering neuronal growth cones by shifting the imbalance between exocytosis and endocytosis. Tojima T, et al. J Neurosci, 2014 May 21. PMID 24849351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-phosphate 5-kinase type-1 gamma
Names
PIPKIgamma87
PIPKIgamma90
phosphatidylinositol-4-phosphate 5-kinase type-1 gamma
NP_001305950.1
XP_015155248.1
XP_015155251.1
XP_015155252.1
XP_040509464.1
XP_046789712.1
XP_046789713.1
XP_046789714.1
XP_046789715.1
XP_046789716.1
XP_046789717.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001319021.2 → NP_001305950.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000374
    UniProtKB/TrEMBL
    A0A060PJH4, A0A060PQF0, A0A1D5P4K5
    Conserved Domains (1) summary
    smart00330
    Location:103 → 443
    PIPKc; Phosphatidylinositol phosphate kinases

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052559.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1417085..1450509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040653530.2 → XP_040509464.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1

    UniProtKB/TrEMBL
    A0A060PQF0
    Conserved Domains (1) summary
    cd17308
    Location:76 → 449
    PIPKc_PIP5K1C; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in phosphatidylinositol 4-phosphate 5-kinase type-1 gamma (PIP5K1gamma) and similar proteins

  2. XM_015299766.4 → XP_015155252.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X4

    UniProtKB/TrEMBL
    A0A060PQF0, A0A8V1AF41
    Related
    ENSGALP00010041858.1, ENSGALT00010068115.1
    Conserved Domains (1) summary
    smart00330
    Location:103 → 443
    PIPKc; Phosphatidylinositol phosphate kinases

  3. XM_015299762.4 → XP_015155248.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X2

    UniProtKB/TrEMBL
    A0A060PQF0, F1ND21
    Related
    ENSGALP00010041861.1, ENSGALT00010068118.1
    Conserved Domains (1) summary
    smart00330
    Location:103 → 443
    PIPKc; Phosphatidylinositol phosphate kinases

  4. XM_015299765.4 → XP_015155251.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X3

    UniProtKB/TrEMBL
    A0A060PQF0, A0A1D5PWJ0
    Related
    ENSGALP00010041856.1, ENSGALT00010068113.1
    Conserved Domains (1) summary
    smart00330
    Location:103 → 443
    PIPKc; Phosphatidylinositol phosphate kinases

RNA

  1. XR_006932216.1 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052600.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    989793..1023256
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046933756.1 → XP_046789712.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1

  2. XM_046933760.1 → XP_046789716.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X4

    UniProtKB/TrEMBL
    A0A8V1AF41

  3. XM_046933757.1 → XP_046789713.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X2

    UniProtKB/TrEMBL
    F1ND21

  4. XM_046933758.1 → XP_046789714.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X5

  5. XM_046933759.1 → XP_046789715.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X3

    UniProtKB/TrEMBL
    A0A1D5PWJ0

  6. XM_046933761.1 → XP_046789717.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X6

Nucleotide Protein
Heading Accession and Version

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