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CCND3 cyclin D3 [ Gallus gallus (chicken) ]

Gene ID: 419928, updated on 17-Aug-2024

Summary

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Symbol
CCND3provided by CGNC
Full Name
cyclin D3provided by CGNC
Primary source
CGNC:2542
See related
Ensembl:ENSGALG00010026588
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CCND3 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (5071618..5110296, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (5025329..5038118, complement)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 20 Neighboring gene bystin like Neighboring gene TATA-box binding protein associated factor 8 Neighboring gene chitinase-M31, acidic Neighboring gene primary cilia formation

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic cell cycle phase transition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin-dependent protein kinase holoenzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G1/S-specific cyclin-D3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008453.2 → NP_001008453.1  G1/S-specific cyclin-D3

    See identical proteins and their annotated locations for NP_001008453.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000356
    UniProtKB/TrEMBL
    Q5ZKI9
    Related
    ENSGALP00010039564.1, ENSGALT00010064572.1
    Conserved Domains (2) summary
    pfam00134
    Location:27 → 152
    Cyclin_N; Cyclin, N-terminal domain
    pfam02984
    Location:155 → 271
    Cyclin_C; Cyclin, C-terminal domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5071618..5110296 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040652738.2 → XP_040508672.1  G1/S-specific cyclin-D3 isoform X2

  2. XM_015298953.4 → XP_015154439.3  G1/S-specific cyclin-D3 isoform X1

  3. XM_046904133.1 → XP_046760089.1  G1/S-specific cyclin-D3 isoform X1

  4. XM_046904132.1 → XP_046760088.1  G1/S-specific cyclin-D3 isoform X3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5025329..5038118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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