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GUCA1B guanylate cyclase activator 1B [ Gallus gallus (chicken) ]

Gene ID: 419864, updated on 12-Oct-2024

Summary

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Symbol
GUCA1Bprovided by CGNC
Full Name
guanylate cyclase activator 1Bprovided by CGNC
Primary source
CGNC:975
See related
Ensembl:ENSGALG00010027222
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
GCAP2
Orthologs
human mouse all
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Genomic context

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See GUCA1B in Genome Data Viewer
Location:
chromosome: 26
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (3213695..3217217)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (3184048..3187570)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene C1orf74 homolog Neighboring gene interferon regulatory factor 6 Neighboring gene guanylate cyclase activator 1A Neighboring gene GUCA1A neighbor Neighboring gene chromosome 6 open reading frame 132

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the chicken GCAP gene array and analyses of GCAP1, GCAP2, and GC1 gene expression in normal and rd chicken pineal. Semple-Rowland SL, et al. Mol Vis, 1999 Jul 28. PMID 10427104
  2. Expression of GCAP1 and GCAP2 in the retinal degeneration (rd) mutant chicken retina. Semple-Rowland SL, et al. FEBS Lett, 1996 Apr 29. PMID 8641465
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium sensitive guanylate cyclase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of guanylate cyclase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cone photoreceptor outer segment IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in photoreceptor inner segment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanylyl cyclase-activating protein 2
Names
GCAP 2
calcium binding protein
guanylate cyclase activating protein 2
guanylate cyclase activator 1B (retina)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007881.2 → NP_001007882.1  guanylyl cyclase-activating protein 2

    See identical proteins and their annotated locations for NP_001007882.1

    Status: PROVISIONAL

    Source sequence(s)
    S82200
    UniProtKB/Swiss-Prot
    P79881
    UniProtKB/TrEMBL
    A0A8V1A7Z7
    Related
    ENSGALP00010040264.1, ENSGALT00010065998.1
    Conserved Domains (1) summary
    COG5126
    Location:13 → 167
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3213695..3217217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3184048..3187570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P79881.3 GenPept UniProtKB/Swiss-Prot:P79881

Gene LinkOut

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