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PQLC2 PQ loop repeat containing 2 [ Gallus gallus (chicken) ]

Gene ID: 419472, updated on 17-Aug-2024

Summary

Symbol
PQLC2provided by CGNC
Full Name
PQ loop repeat containing 2provided by CGNC
Primary source
CGNC:51006
See related
Ensembl:ENSGALG00010020594
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SLC66A1
Orthologs
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Genomic context

See PQLC2 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 21 NC_052552.1 (4670636..4674664)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 21 NC_052593.1 (4703884..4707863)

Chromosome 21 - NC_052552.1Genomic Context describing neighboring genes Neighboring gene MRT4 homolog, ribosome maturation factor Neighboring gene aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) Neighboring gene capping actin protein of muscle Z-line beta subunit Neighboring gene mitochondrial inner membrane organizing system 1

Genomic regions, transcripts, and products

Pathways from PubChem

General protein information

Preferred Names
lysosomal amino acid transporter 1 homolog
Names
PQ-loop repeat-containing protein 2
solute carrier family 66 member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006304.2NP_001006304.2  lysosomal amino acid transporter 1 homolog

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000329
    UniProtKB/Swiss-Prot
    E1BY15, Q5ZJX0
    UniProtKB/TrEMBL
    A0A8V0ZL71
    Related
    ENSGALP00010029370.1, ENSGALT00010049707.1
    Conserved Domains (1) summary
    smart00679
    Location:204234
    CTNS; Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052552.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4670636..4674664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040651183.2XP_040507117.1  lysosomal amino acid transporter 1 homolog isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052593.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4703884..4707863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046931307.1XP_046787263.1  lysosomal amino acid transporter 1 homolog isoform X1