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ARFRP1 ADP ribosylation factor related protein 1 [ Gallus gallus (chicken) ]

Gene ID: 419261, updated on 17-Aug-2024

Summary

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Symbol
ARFRP1provided by CGNC
Full Name
ADP ribosylation factor related protein 1provided by CGNC
Primary source
CGNC:4579
See related
Ensembl:ENSGALG00010024960
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ARFRP1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (9971420..9982027)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (9753193..9763802)

Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene Lck interacting transmembrane adaptor 1 Neighboring gene zinc finger CCCH-type and G-patch domain containing Neighboring gene uncharacterized LOC124417339 Neighboring gene TNF receptor superfamily member 6b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to plasma membrane protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-related protein 1
XP_004947186.1
XP_040544119.1
XP_040544120.1
XP_417433.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9971420..9982027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004947129.5 → XP_004947186.1  ADP-ribosylation factor-related protein 1

    See identical proteins and their annotated locations for XP_004947186.1

    UniProtKB/TrEMBL
    A0A3Q2TYK8, E1C1J0
    Related
    ENSGALP00010037706.1, ENSGALT00010060957.1
    Conserved Domains (1) summary
    cd04160
    Location:19 → 186
    Arfrp1; Arf-related protein 1 (Arfrp1)

  2. XM_417433.8 → XP_417433.2  ADP-ribosylation factor-related protein 1

    See identical proteins and their annotated locations for XP_417433.2

    UniProtKB/TrEMBL
    A0A3Q2TYK8, E1C1J0
    Related
    ENSGALP00010037703.1, ENSGALT00010060954.1
    Conserved Domains (1) summary
    cd04160
    Location:19 → 186
    Arfrp1; Arf-related protein 1 (Arfrp1)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9753193..9763802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040688186.2 → XP_040544120.1  ADP-ribosylation factor-related protein 1

    UniProtKB/TrEMBL
    A0A3Q2TYK8, E1C1J0
    Conserved Domains (1) summary
    cd04160
    Location:19 → 186
    Arfrp1; Arf-related protein 1 (Arfrp1)

  2. XM_040688185.2 → XP_040544119.1  ADP-ribosylation factor-related protein 1

    UniProtKB/TrEMBL
    A0A3Q2TYK8, E1C1J0
    Conserved Domains (1) summary
    cd04160
    Location:19 → 186
    Arfrp1; Arf-related protein 1 (Arfrp1)
Nucleotide Protein Strain
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