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NCOA3 nuclear receptor coactivator 3 [ Gallus gallus (chicken) ]

Gene ID: 419208, updated on 17-Aug-2024

Summary

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Symbol
NCOA3provided by CGNC
Full Name
nuclear receptor coactivator 3provided by CGNC
Primary source
CGNC:3378
See related
Ensembl:ENSGALG00010023925
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See NCOA3 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
24
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (6185068..6260734)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (5967361..6052237)

Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054876 Neighboring gene EYA transcriptional coactivator and phosphatase 2 Neighboring gene zinc finger MYND-type containing 8 Neighboring gene sulfatase 2 Neighboring gene uncharacterized LOC112530108 Neighboring gene phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 Neighboring gene ADP ribosylation factor guanine nucleotide exchange factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor coactivator 3
XP_004947108.3
XP_004947111.2
XP_004947113.3
XP_024998162.2
XP_040544552.1
XP_040544554.1
XP_040544555.1
XP_040544556.1
XP_040544557.1
XP_040544560.1
XP_040544561.1
XP_040544562.1
XP_040544563.1
XP_040544565.1
XP_040544566.1
XP_046786842.1
XP_046786843.1
XP_046786844.1
XP_046786845.1
XP_046786846.1
XP_046786847.1
XP_046786848.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6185068..6260734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004947051.4 → XP_004947108.3  nuclear receptor coactivator 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZYK0
    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  2. XM_004947054.5 → XP_004947111.2  nuclear receptor coactivator 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZYK0
    Related
    ENSGALP00010035403.1, ENSGALT00010058278.1
    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  3. XM_004947056.5 → XP_004947113.3  nuclear receptor coactivator 3 isoform X2

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1106 → 1394
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  4. XM_025142394.3 → XP_024998162.2  nuclear receptor coactivator 3 isoform X3

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1106 → 1393
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5967361..6052237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046930891.1 → XP_046786847.1  nuclear receptor coactivator 3 isoform X1

  2. XM_046930889.1 → XP_046786845.1  nuclear receptor coactivator 3 isoform X1

  3. XM_040688622.2 → XP_040544556.1  nuclear receptor coactivator 3 isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  4. XM_046930886.1 → XP_046786842.1  nuclear receptor coactivator 3 isoform X1

  5. XM_046930890.1 → XP_046786846.1  nuclear receptor coactivator 3 isoform X1

  6. XM_046930888.1 → XP_046786844.1  nuclear receptor coactivator 3 isoform X1

  7. XM_046930887.1 → XP_046786843.1  nuclear receptor coactivator 3 isoform X1

  8. XM_046930892.1 → XP_046786848.1  nuclear receptor coactivator 3 isoform X1

  9. XM_040688623.2 → XP_040544557.1  nuclear receptor coactivator 3 isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  10. XM_040688620.2 → XP_040544554.1  nuclear receptor coactivator 3 isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  11. XM_040688631.2 → XP_040544565.1  nuclear receptor coactivator 3 isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  12. XM_040688628.2 → XP_040544562.1  nuclear receptor coactivator 3 isoform X4

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1394
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  13. XM_040688627.2 → XP_040544561.1  nuclear receptor coactivator 3 isoform X2

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1106 → 1394
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  14. XM_040688629.2 → XP_040544563.1  nuclear receptor coactivator 3 isoform X3

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1106 → 1393
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  15. XM_040688632.2 → XP_040544566.1  nuclear receptor coactivator 3 isoform X5

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1043 → 1331
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  16. XM_040688626.2 → XP_040544560.1  nuclear receptor coactivator 3 isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  17. XM_040688618.2 → XP_040544552.1  nuclear receptor coactivator 3 isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins

  18. XM_040688621.2 → XP_040544555.1  nuclear receptor coactivator 3 isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:121 → 178
    PAS; PAS domain
    pfam09606
    Location:1107 → 1395
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18949
    Location:34 → 106
    bHLH-PAS_NCoA3_SRC3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 3 (NCoA-3) and similar proteins
Nucleotide Protein
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